Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_008194.1 Length=74483 Score E Sequences producing significant alignments: (Bits) Value seq4741 307 5e-79 >seq4741 Length=15116 Score = 307 bits (340), Expect = 5e-79 Identities = 539/770 (70%), Gaps = 25/770 (3%) Strand=Plus/Plus Query 65396 GTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGG 65455 || ||| |||||||||| |||| ||||| ||| ||||| ||||| || || || Sbjct 13623 GTGATTTCCACCGGCTCCATCGGGCTGGATATCGCGCTGGGGATCGGCGGCATGCCCCGG 13682 Query 65456 GGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCAC 65515 ||||| | || || ||||| ||||| ||| || || ||| | || || || || Sbjct 13683 GGCCGCATTGTCGAGATCTATGGCCCGGAAAGCTCGGGCAAGACCACACTTGCCCTGCAT 13742 Query 65516 GCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCC 65575 | ||||| | || |||||| || |||| || ||||| |||||| || || || | Sbjct 13743 GTTCTGGCCGAAGCCCAGAAGAAGGGCGGCACCGTCGCCTTCATCGATGCCGAACATGCG 13802 Query 65576 CTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAG 65635 || ||||| | |||||| ||||| || | ||||| |||| | || ||| Sbjct 13803 CTCGACCCCGGTTACGCCCGCAAACTCGGCGTCAATATCGACGACCTTCTCCTGAGCCAG 13862 Query 65636 CCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTG 65695 ||||| | ||||| ||||| ||||| |||| || |||||| || |||| || Sbjct 13863 CCGGATGCCGGCGAACAGGCTCTGGAAATCGCCGATACGCTCGTCCGTTCCGGCGCCGTG 13922 Query 65696 TCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGAC 65755 | | | ||||| ||||| || ||||| || || |||||||||||||| ||||||||| Sbjct 13923 GACGTTCTGGTCGTGGACTCCGTTGCGGCTCTCGTCCCGCGCGCCGAGCTTGAAGGCGAC 13982 Query 65756 ATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTC 65815 || || ||||| || || || |||||||| || |||||| ||||| |||||||||| Sbjct 13983 ATGGGCGACAGCCATGTTGGTCTGCACGCCCGTCTCATGAGCCAGGCTCTGCGCAAGCTG 14042 Query 65816 ACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 65875 || || || |||| || |||||||||| | ||| | |||||| | || ||| Sbjct 14043 ACGGGAACGGTCTCGCGCTCCAACACGCTCGTGATCTTCCTGAACCAGATCCGTATGAAA 14102 Query 65876 ATCGGCAACGTGGGCTACGGC---CCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGG 65932 ||||| |||| | |||| ||| ||||| |||||||||||||| || ||| Sbjct 14103 ATCGG---CGTGATGTTCGGCAATCCG---GAGACGACCACGGGCGGCAACGC-CTGA-A 14154 Query 65933 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGA-AGGCGATGA 65991 |||||| |||| ||||| || | | || |||| | | || | ||||| | || || Sbjct 14155 TTCTACCCCTCCATCCGCCTGAA--TACGCCGCAGCCGCTCC-ACAAGGACAAAGGACGA 14211 Query 65992 GGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 66051 || || |||| ||| ||||| || |||||||||||||||||| ||||||| ||| ||| Sbjct 14212 GGTTG-CGGC-ACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCCCCCCCGTTCCG 14269 Query 66052 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCG 66110 | | ||||||| | || |||| || || |||||| || || || |||||| |||| Sbjct 14270 TCAGGTCGAGTTCGACATCATGTATGGCGAAGGCATC-AGCAAGATGGGCGAACTGCTCG 14328 Query 66111 ACCTGGCCGTGTCGCAGGG---CCTGGTGAAGAAGTCGGGCGCCTGGTTC 66157 | |||| ||| | |||| | | || |||| || ||||| |||||| Sbjct 14329 ATCTGGGCGT---GAAGGGCAACATCGTCGAGAAATCCGGCGCATGGTTC 14375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238147804829128