Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_008194.1
Length=74483
Score E
Sequences producing significant alignments: (Bits) Value
seq4741 307 5e-79
>seq4741
Length=15116
Score = 307 bits (340), Expect = 5e-79
Identities = 539/770 (70%), Gaps = 25/770 (3%)
Strand=Plus/Plus
Query 65396 GTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGG 65455
|| ||| |||||||||| |||| ||||| ||| ||||| ||||| || || ||
Sbjct 13623 GTGATTTCCACCGGCTCCATCGGGCTGGATATCGCGCTGGGGATCGGCGGCATGCCCCGG 13682
Query 65456 GGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCAC 65515
||||| | || || ||||| ||||| ||| || || ||| | || || || ||
Sbjct 13683 GGCCGCATTGTCGAGATCTATGGCCCGGAAAGCTCGGGCAAGACCACACTTGCCCTGCAT 13742
Query 65516 GCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCC 65575
| ||||| | || |||||| || |||| || ||||| |||||| || || || |
Sbjct 13743 GTTCTGGCCGAAGCCCAGAAGAAGGGCGGCACCGTCGCCTTCATCGATGCCGAACATGCG 13802
Query 65576 CTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAG 65635
|| ||||| | |||||| ||||| || | ||||| |||| | || |||
Sbjct 13803 CTCGACCCCGGTTACGCCCGCAAACTCGGCGTCAATATCGACGACCTTCTCCTGAGCCAG 13862
Query 65636 CCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTG 65695
||||| | ||||| ||||| ||||| |||| || |||||| || |||| ||
Sbjct 13863 CCGGATGCCGGCGAACAGGCTCTGGAAATCGCCGATACGCTCGTCCGTTCCGGCGCCGTG 13922
Query 65696 TCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGAC 65755
| | | ||||| ||||| || ||||| || || |||||||||||||| |||||||||
Sbjct 13923 GACGTTCTGGTCGTGGACTCCGTTGCGGCTCTCGTCCCGCGCGCCGAGCTTGAAGGCGAC 13982
Query 65756 ATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTC 65815
|| || ||||| || || || |||||||| || |||||| ||||| ||||||||||
Sbjct 13983 ATGGGCGACAGCCATGTTGGTCTGCACGCCCGTCTCATGAGCCAGGCTCTGCGCAAGCTG 14042
Query 65816 ACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 65875
|| || || |||| || |||||||||| | ||| | |||||| | || |||
Sbjct 14043 ACGGGAACGGTCTCGCGCTCCAACACGCTCGTGATCTTCCTGAACCAGATCCGTATGAAA 14102
Query 65876 ATCGGCAACGTGGGCTACGGC---CCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGG 65932
||||| |||| | |||| ||| ||||| |||||||||||||| || |||
Sbjct 14103 ATCGG---CGTGATGTTCGGCAATCCG---GAGACGACCACGGGCGGCAACGC-CTGA-A 14154
Query 65933 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGA-AGGCGATGA 65991
|||||| |||| ||||| || | | || |||| | | || | ||||| | || ||
Sbjct 14155 TTCTACCCCTCCATCCGCCTGAA--TACGCCGCAGCCGCTCC-ACAAGGACAAAGGACGA 14211
Query 65992 GGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 66051
|| || |||| ||| ||||| || |||||||||||||||||| ||||||| ||| |||
Sbjct 14212 GGTTG-CGGC-ACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCCCCCCCGTTCCG 14269
Query 66052 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCG 66110
| | ||||||| | || |||| || || |||||| || || || |||||| ||||
Sbjct 14270 TCAGGTCGAGTTCGACATCATGTATGGCGAAGGCATC-AGCAAGATGGGCGAACTGCTCG 14328
Query 66111 ACCTGGCCGTGTCGCAGGG---CCTGGTGAAGAAGTCGGGCGCCTGGTTC 66157
| |||| ||| | |||| | | || |||| || ||||| ||||||
Sbjct 14329 ATCTGGGCGT---GAAGGGCAACATCGTCGAGAAATCCGGCGCATGGTTC 14375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238147804829128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |