Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value SEQ12849 98.7 2e-17 SEQ10683 98.7 2e-17 seq5408 98.7 2e-17 >SEQ12849 Length=8069 Score = 98.7 bits (108), Expect = 2e-17 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 3344 GAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGG 3403 |||||||||||| | | || ||| || || ||||||||||||||||| ||||| || Sbjct 198 GAGTCTTTCCAAAAGTAACAAAATGCACCTTCCACAAATACGGTCCTTCTGGCTCGGTGC 139 Query 3404 AAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTT 3463 | || | ||| || || ||| | | || ||| | ||||||||||| |||||| | | Sbjct 138 AGAAATTCGATGGTCTTTGCGTGTTGCCATTGAATATTGTCAACGAGAAAATCTACGTGT 79 Query 3464 TCCTCTGGTTCTGGTTC 3480 |||| |||||||||||| Sbjct 78 TCCTGTGGTTCTGGTTC 62 >SEQ10683 Length=15648 Score = 98.7 bits (108), Expect = 2e-17 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 3344 GAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGG 3403 |||||||||||| | | || ||| || || ||||||||||||||||| ||||| || Sbjct 14505 GAGTCTTTCCAAAAGTAACAAAATGCACCTTCCACAAATACGGTCCTTCTGGCTCGGTGC 14446 Query 3404 AAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTT 3463 | || | ||| || || ||| | | || ||| | ||||||||||| |||||| | | Sbjct 14445 AGAAATTCGATGGTCTTTGCGTGTTGCCATTGAATATTGTCAACGAGAAAATCTACGTGT 14386 Query 3464 TCCTCTGGTTCTGGTTC 3480 |||| |||||||||||| Sbjct 14385 TCCTGTGGTTCTGGTTC 14369 >seq5408 Length=75798 Score = 98.7 bits (108), Expect = 2e-17 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 3344 GAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGG 3403 |||||||||||| | | || ||| || || ||||||||||||||||| ||||| || Sbjct 17432 GAGTCTTTCCAAAAGTAACAAAATGCACCTTCCACAAATACGGTCCTTCTGGCTCGGTGC 17491 Query 3404 AAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTT 3463 | || | ||| || || ||| | | || ||| | ||||||||||| |||||| | | Sbjct 17492 AGAAATTCGATGGTCTTTGCGTGTTGCCATTGAATATTGTCAACGAGAAAATCTACGTGT 17551 Query 3464 TCCTCTGGTTCTGGTTC 3480 |||| |||||||||||| Sbjct 17552 TCCTGTGGTTCTGGTTC 17568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12476568117000