Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 134 3e-26 SEQ18478 131 4e-25 seq9966 131 4e-25 seq5553 131 4e-25 seq2607 131 4e-25 >SEQ18352 Length=541547 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| ||||| | | ||||| || ||||| || || || || || || Sbjct 390260 TTCCTTTTGGATATTGTAGTCAGATAAGGTGCGACCATCTTCCAACTGCTTACCAGCAAA 390201 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| |||||||||| ||| || ||||||||||| |||||||| ||||| ||||| Sbjct 390200 AATCAAACGCTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTAGCTTTGACGTT 390141 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| || || || || | ||||| || || ||||||| |||||| || Sbjct 390140 CTCGATAGTATCAGACGGCTCGACCTCTAAGGTGATAGTTTTACCGGTCAAAGTCTTTAC 390081 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 390080 AAAAATCTGCAT 390069 Score = 127 bits (140), Expect = 5e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | |||||| || ||||| || || || || ||||| Sbjct 389348 TTCCTTTTGGATGTTGTAGTCAGATAACGTGCGACCATCTTCCAACTGCTTACCAGCGAA 389289 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||||||||| |||||| || ||||||||||| ||||| || || || || Sbjct 389288 AATCAAACGCTGTTGG---TCTGGGGGAATGCCTTCTTTATCTTGGATCTTAGCCTTGAC 389232 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||| || | ||| | ||| ||||| | || || || || || |||| |||||| Sbjct 389231 GTTTTCAATTGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTGCCAGTCAAAGTCTT 389172 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 389171 GACGAAAATTTGCAT 389157 Score = 127 bits (140), Expect = 5e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || ||||||| ||| || || || ||||| | |||||| || || || Sbjct 399885 TTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAA 399826 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| ||||| |||||| ||||| || |||||||| || || ||||| | ||| || Sbjct 399825 GATTAGACGTTGTTGA---TCTGGCGGTATACCTTCTTTGTCTTGAATTTTAGATTTTAC 399769 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||||| | || ||||||||||| | ||||| || || || |||| ||| || Sbjct 399768 ATTTTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTT 399709 Query 288459 GACGAATATCTGCAT 288473 ||| ||||||||||| Sbjct 399708 GACAAATATCTGCAT 399694 Score = 118 bits (130), Expect = 3e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| || |||| ||| ||||| || ||||| |||||||| || || || Sbjct 401253 TTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCTTCCAATTGTTTACCAGCAAA 401194 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| ||||| ||||| || || ||||| || || ||||| || || || Sbjct 401193 TATCAAACGTTGTTGG---TCTGGAGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTGAC 401137 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || ||| ||| | ||| ||||| || || || ||||| |||||||| || || Sbjct 401136 GTTCTCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGTCTTGCCGGTCAGGGTTTT 401077 Query 288459 GACGAATATCTGCAT 288473 || ||||||||||| Sbjct 401076 AACAAATATCTGCAT 401062 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || || || ||||| | |||||| || || || Sbjct 390944 TTCCTTTTGGATGTTGTAGTCGGACAAAGTACGACCATCTTCAAGTTGTTTGCCAGCAAA 390885 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | |||||||||| |||||| || ||||||||||| |||||||| || || || Sbjct 390884 GATTAAACGCTGTTGA---TCTGGGGGAATGCCTTCTTTATCTTGGATTTTAGCCTTAAC 390828 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | || | || || || | || || || || || |||| |||||| Sbjct 390827 ATTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATGGTTTTGCCAGTCAAAGTCTT 390768 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 390767 GACGAAGATTTGCAT 390753 Score = 114 bits (126), Expect = 3e-20 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 288264 TACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTC 288323 ||| | ||||| ||| |||||| || || || ||||| | ||| ||||| || ||||| Sbjct 402183 TACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATCTTC 402124 Query 288324 TAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATC 288380 |||||||| || ||||| |||| ||| ||||| ||||| || ||||||||||| Sbjct 402123 CAATTGTTTACCAGCGAAAATCAAACGTTGTTGG---TCTGGAGGAATGCCTTCTTTATC 402067 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 || ||||| || || ||||| || || | || | ||| ||||| | || || || Sbjct 402066 TTGAATTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGT 402007 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||| || || || ||||||||||| Sbjct 402006 TTTGCCAGTCAAGGTTTTTACAAATATCTGCAT 401974 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | ||||| || ||| || || || ||||| || | Sbjct 399692 CCACCGCGAAGACGAAGAACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAATCAGAC 399633 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || |||||||| | ||| || || || || || | ||||||||| ||||| Sbjct 399632 AAAGTACGACCGTCTTCAAGTTGCTTGCCAGCAAATATTAAACGCTGTTGG---TCTGGA 399576 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||||||||| |||||||| || || || |||||||| | ||| | ||| Sbjct 399575 GGAATACCTTCTTTATCTTGGATTTTGGCCTTAACATTTTCTATTGTATCAGATGCTTCA 399516 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || || || || || | ||| || || || |||||||| Sbjct 399515 ACTTCCAATGTTATGGTTTTGCCAGTTAAAGTTTTAACAAAGATCTGCAT 399466 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| || || | ||| || ||||| ||||| |||||||| || ||||| Sbjct 400341 TTCCTTTTGAATATTGTAATCAGAGAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAA 400282 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| ||||| ||||| || || |||||||| || || || || || || Sbjct 400281 AATCAAACGTTGTTGG---TCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTTGAC 400225 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | || | ||| ||||| | || || || || || |||| || || Sbjct 400224 GTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATAGTTTTGCCAGTCAAGGTTTT 400165 Query 288459 GACGAATATCTGCAT 288473 || ||||||||||| Sbjct 400164 AACAAATATCTGCAT 400150 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| || |||| ||| || ||||| ||||| ||||| || || ||||| Sbjct 400797 TTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTCCAATTGCTTACCAGCGAA 400738 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| ||||| ||||| || || |||||||| || || || || || || Sbjct 400737 AATCAAACGTTGTTGG---TCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTTGAC 400681 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | || | ||| ||||| | ||| || || || || |||| || || Sbjct 400680 GTTCTCAATTGTGTCAGATGCTTCGACTTCCAACGTAATTGTTTTGCCAGTCAAGGTTTT 400621 Query 288459 GACGAATATCTGCAT 288473 || ||||||||||| Sbjct 400620 AACAAATATCTGCAT 400606 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| || |||| ||| || ||||| ||||| ||||| || || ||||| Sbjct 401709 TTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTCCAATTGCTTACCAGCGAA 401650 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| ||||| ||||| || || |||||||| || || || || || || Sbjct 401649 AATCAAACGTTGTTGG---TCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTTGAC 401593 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | || | ||| ||||| | || || || || || |||| || || Sbjct 401592 GTTCTCAATTGTGTCAGATGCTTCGACTTCCAATGTAATTGTTTTGCCAGTCAAGGTTTT 401533 Query 288459 GACGAATATCTGCAT 288473 || ||||||||||| Sbjct 401532 AACAAATATCTGCAT 401518 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | | || || || ||||| | || || || ||||| Sbjct 389803 TCCTTTTGGATGTTGTAGTCAGATAAGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAA 389744 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||||||| ||||| || |||||||| || ||||| || ||||| || Sbjct 389743 ATCAAACGCTGTTGA---TCTGGAGGAATACCTTCTTTGTCTTGGATCTTAGCTTTGACA 389687 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | || | || || || | || || || || || |||| ||||||| Sbjct 389686 TTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTG 389627 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 389626 ACGAAGATTTGCAT 389613 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | | || || || ||||| | || || || ||||| Sbjct 391171 TCCTTTTGGATGTTGTAGTCAGATAAGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAA 391112 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||||||| ||||| || |||||||| || ||||| || ||||| || Sbjct 391111 ATCAAACGCTGTTGA---TCTGGAGGAATACCTTCTTTGTCTTGGATCTTAGCTTTGACA 391055 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | || | || || || | || || || || || |||| ||||||| Sbjct 391054 TTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTG 390995 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 390994 ACGAAGATTTGCAT 390981 >SEQ18478 Length=82247 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||||| | |||||||| ||||| | ||| || || ||||| Sbjct 41448 TCCTTTTGAATGTTGTAGTCGGATAAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAA 41507 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||| |||||| ||| || || || ||||| |||||||| || ||||| ||| Sbjct 41508 ATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTT 41567 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | || ||||| | ||||| ||||| ||||||| ||| || ||| Sbjct 41568 TCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACG 41627 Query 288463 AATATCTGCATTATG 288477 |||||||||||| || Sbjct 41628 AATATCTGCATTTTG 41642 >seq9966 Length=18433 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||||| | |||||||| ||||| | ||| || || ||||| Sbjct 14159 TCCTTTTGAATGTTGTAGTCGGATAAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAA 14218 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||| |||||| ||| || || || ||||| |||||||| || ||||| ||| Sbjct 14219 ATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTT 14278 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | || ||||| | ||||| ||||| ||||||| ||| || ||| Sbjct 14279 TCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACG 14338 Query 288463 AATATCTGCATTATG 288477 |||||||||||| || Sbjct 14339 AATATCTGCATTTTG 14353 >seq5553 Length=18996 Score = 131 bits (144), Expect = 4e-25 Identities = 149/199 (75%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| |||||||| |||| | ||||| || ||||| |||||||| || || || Sbjct 18550 TTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCTTCCAATTGTTTACCAGCAAA 18491 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| || ||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct 18490 AATCAAACGTTGCTGA---TCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTGAC 18434 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| |||| || | ||| || || || ||||| ||||| || || || ||||| Sbjct 18433 ATTTTCGATAGTGTCCGATGGTTCAACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTT 18374 Query 288459 GACGAATATCTGCATTATG 288477 ||||||||||||||| || Sbjct 18373 AACGAATATCTGCATTTTG 18355 >seq2607 Length=223464 Score = 131 bits (144), Expect = 4e-25 Identities = 149/199 (75%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| |||||||| |||| | ||||| || ||||| |||||||| || || || Sbjct 124840 TTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCTTCCAATTGTTTACCAGCAAA 124899 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| || ||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct 124900 AATCAAACGTTGCTGA---TCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTGAC 124956 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| |||| || | ||| || || || ||||| ||||| || || || ||||| Sbjct 124957 ATTTTCGATAGTGTCCGATGGTTCCACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTT 125016 Query 288459 GACGAATATCTGCATTATG 288477 ||||||||||||||| || Sbjct 125017 AACGAATATCTGCATTTTG 125035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179274395716276