Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_011056.1
Length=75811
Score E
Sequences producing significant alignments: (Bits) Value
seq4741 228 4e-55
>seq4741
Length=15116
Score = 228 bits (252), Expect = 4e-55
Identities = 473/693 (68%), Gaps = 17/693 (2%)
Strand=Plus/Plus
Query 65913 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 65972
||| |||||||||| || | ||||| ||| || || ||||| || || |||||
Sbjct 13626 ATTTCCACCGGCTCCATCGGGCTGGATATCGCGCTGGGGATCGGCGGCATGCCCCGGGGC 13685
Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032
|| | || |||||||| || || || || || ||| | || | ||| || |
Sbjct 13686 CGCATTGTCGAGATCTATGGCCCGGAAAGCTCGGGCAAGACCACACTTGCCCTGCATGTT 13745
Query 66033 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 66092
||||| | ||||||||| || |||| || ||||| |||||| ||||||||| | |||
Sbjct 13746 CTGGCCGAAGCCCAGAAGAAGGGCGGCACCGTCGCCTTCATCGATGCCGAACATGCGCTC 13805
Query 66093 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 66152
||||| | |||||| ||||| || || ||||| | || | | |||||
Sbjct 13806 GACCCCGGTTACGCCCGCAAACTCGGCGTCAATATCGACGACCTTCTCCTGAGCCAGCCG 13865
Query 66153 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCC 66212
|| | ||||| ||||| ||||| |||| || |||||| || |||| || |
Sbjct 13866 GATGCCGGCGAACAGGCTCTGGAAATCGCCGATACGCTCGTCCGTTCCGGCGCCGTGGAC 13925
Query 66213 ATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATC 66272
| | || |||||||| || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 13926 GTTCTGGTCGTGGACTCCGTTGCGGCTCTCGTCCCGCGCGCCGAGCTTGAAGGCGACATG 13985
Query 66273 GGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACC 66332
|| ||| || || || ||||| ||||| || ||| ||||| |||||||||||||
Sbjct 13986 GGCGACAGCCATGTTGGTCTGCACGCCCGTCTCATGAGCCAGGCTCTGCGCAAGCTGACG 14045
Query 66333 GGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATC 66392
|| ||| | | || ||||||||||| | | |||| ||| | || ||| |||
Sbjct 14046 GGAACGGTCTCGCGCTCCAACACGCTCGTGATCTTCCTGAACCAGATCCGTATGAAAATC 14105
Query 66393 GGCAACGTGGGCTACGGC---CCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTC 66449
|| |||| | |||| ||| ||||| ||||| || || || || ||| |||
Sbjct 14106 GG---CGTGATGTTCGGCAATCCG---GAGACGACCACGGGCGGCAACGC-CTG-AATTC 14157
Query 66450 TACGCCTCGGTGCGTATGGAT-GTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 66508
||| |||| | || || || |||||| | ||| | || | ||| || ||||
Sbjct 14158 TACCCCTCCATCCGCCTGAATACGCCGCAGCCGCTCCA-CAAGGACAAAG--GACGAGGT 14214
Query 66509 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCA 66568
|| |||| ||| || ||||| ||||| |||||||||||| |||| || ||| ||| ||
Sbjct 14215 TG-CGGC-ACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCCCCCCCGTTCCGTCA 14272
Query 66569 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCAT 66601
|| ||||| |||| | || ||||| |||||
Sbjct 14273 GGTCGAGTTCGACATCATGTATGGCGAAGGCAT 14305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242396102674664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |