Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq4741 228 4e-55 >seq4741 Length=15116 Score = 228 bits (252), Expect = 4e-55 Identities = 473/693 (68%), Gaps = 17/693 (2%) Strand=Plus/Plus Query 65913 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 65972 ||| |||||||||| || | ||||| ||| || || ||||| || || ||||| Sbjct 13626 ATTTCCACCGGCTCCATCGGGCTGGATATCGCGCTGGGGATCGGCGGCATGCCCCGGGGC 13685 Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032 || | || |||||||| || || || || || ||| | || | ||| || | Sbjct 13686 CGCATTGTCGAGATCTATGGCCCGGAAAGCTCGGGCAAGACCACACTTGCCCTGCATGTT 13745 Query 66033 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 66092 ||||| | ||||||||| || |||| || ||||| |||||| ||||||||| | ||| Sbjct 13746 CTGGCCGAAGCCCAGAAGAAGGGCGGCACCGTCGCCTTCATCGATGCCGAACATGCGCTC 13805 Query 66093 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 66152 ||||| | |||||| ||||| || || ||||| | || | | ||||| Sbjct 13806 GACCCCGGTTACGCCCGCAAACTCGGCGTCAATATCGACGACCTTCTCCTGAGCCAGCCG 13865 Query 66153 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCC 66212 || | ||||| ||||| ||||| |||| || |||||| || |||| || | Sbjct 13866 GATGCCGGCGAACAGGCTCTGGAAATCGCCGATACGCTCGTCCGTTCCGGCGCCGTGGAC 13925 Query 66213 ATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATC 66272 | | || |||||||| || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 13926 GTTCTGGTCGTGGACTCCGTTGCGGCTCTCGTCCCGCGCGCCGAGCTTGAAGGCGACATG 13985 Query 66273 GGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACC 66332 || ||| || || || ||||| ||||| || ||| ||||| ||||||||||||| Sbjct 13986 GGCGACAGCCATGTTGGTCTGCACGCCCGTCTCATGAGCCAGGCTCTGCGCAAGCTGACG 14045 Query 66333 GGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATC 66392 || ||| | | || ||||||||||| | | |||| ||| | || ||| ||| Sbjct 14046 GGAACGGTCTCGCGCTCCAACACGCTCGTGATCTTCCTGAACCAGATCCGTATGAAAATC 14105 Query 66393 GGCAACGTGGGCTACGGC---CCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTC 66449 || |||| | |||| ||| ||||| ||||| || || || || ||| ||| Sbjct 14106 GG---CGTGATGTTCGGCAATCCG---GAGACGACCACGGGCGGCAACGC-CTG-AATTC 14157 Query 66450 TACGCCTCGGTGCGTATGGAT-GTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 66508 ||| |||| | || || || |||||| | ||| | || | ||| || |||| Sbjct 14158 TACCCCTCCATCCGCCTGAATACGCCGCAGCCGCTCCA-CAAGGACAAAG--GACGAGGT 14214 Query 66509 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCA 66568 || |||| ||| || ||||| ||||| |||||||||||| |||| || ||| ||| || Sbjct 14215 TG-CGGC-ACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCCCCCCCGTTCCGTCA 14272 Query 66569 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCAT 66601 || ||||| |||| | || ||||| ||||| Sbjct 14273 GGTCGAGTTCGACATCATGTATGGCGAAGGCAT 14305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242396102674664