Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23413 87.8 3e-12
SEQ14824 87.8 3e-12
>SEQ23413
Length=15718
Score = 87.8 bits (96), Expect = 3e-12
Identities = 225/340 (66%), Gaps = 7/340 (2%)
Strand=Plus/Plus
Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805
||||| | || || ||||||||||| || | |||| | | || || || || ||
Sbjct 616 AGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGG 675
Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865
|| |||| | | ||| | | || ||||| || ||||| | || || || || | |
Sbjct 676 AGATTAACAGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATA 735
Query 159866 ATCTGCGAGACACGTT-CGTACCCCGGC-TTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
|| | | ||||| | || | | |||| | |||||| | ||||| ||||
Sbjct 736 ATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGT-----TGAAACATAAGGC 790
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| |||||||| || || | |||||| || ||||| || || || || || | | | |
Sbjct 791 ATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAAC 850
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| |||| ||| ||||| | || | ||| ||||| || |||||| || || ||||| |
Sbjct 851 CAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATA 910
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083
| || || || || ||||| || | || | ||||||||
Sbjct 911 TACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAA 950
>SEQ14824
Length=19491
Score = 87.8 bits (96), Expect = 3e-12
Identities = 225/340 (66%), Gaps = 7/340 (2%)
Strand=Plus/Plus
Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805
||||| | || || ||||||||||| || | |||| | | || || || || ||
Sbjct 4952 AGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGG 5011
Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865
|| |||| | | ||| | | || ||||| || ||||| | || || || || | |
Sbjct 5012 AGATTAACAGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATA 5071
Query 159866 ATCTGCGAGACACGTT-CGTACCCCGGC-TTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
|| | | ||||| | || | | |||| | |||||| | ||||| ||||
Sbjct 5072 ATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGT-----TGAAACATAAGGC 5126
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| |||||||| || || | |||||| || ||||| || || || || || | | | |
Sbjct 5127 ATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAAC 5186
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| |||| ||| ||||| | || | ||| ||||| || |||||| || || ||||| |
Sbjct 5187 CAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATA 5246
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083
| || || || || ||||| || | || | ||||||||
Sbjct 5247 TACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAA 5286
Score = 87.8 bits (96), Expect = 3e-12
Identities = 225/340 (66%), Gaps = 7/340 (2%)
Strand=Plus/Plus
Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805
||||| | || || ||||||||||| || | |||| | | || || || || ||
Sbjct 11751 AGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGG 11810
Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865
|| |||| | | ||| | | || ||||| || ||||| | || || || || | |
Sbjct 11811 AGATTAACAGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATA 11870
Query 159866 ATCTGCGAGACACGTT-CGTACCCCGGC-TTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
|| | | ||||| | || | | |||| | |||||| | ||||| ||||
Sbjct 11871 ATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGT-----TGAAACATAAGGC 11925
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| |||||||| || || | |||||| || ||||| || || || || || | | | |
Sbjct 11926 ATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAAC 11985
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| |||| ||| ||||| | || | ||| ||||| || |||||| || || ||||| |
Sbjct 11986 CAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATA 12045
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083
| || || || || ||||| || | || | ||||||||
Sbjct 12046 TACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAA 12085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794905302599520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |