Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value SEQ23413 87.8 3e-12 SEQ14824 87.8 3e-12 >SEQ23413 Length=15718 Score = 87.8 bits (96), Expect = 3e-12 Identities = 225/340 (66%), Gaps = 7/340 (2%) Strand=Plus/Plus Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805 ||||| | || || ||||||||||| || | |||| | | || || || || || Sbjct 616 AGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGG 675 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || |||| | | ||| | | || ||||| || ||||| | || || || || | | Sbjct 676 AGATTAACAGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATA 735 Query 159866 ATCTGCGAGACACGTT-CGTACCCCGGC-TTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 || | | ||||| | || | | |||| | |||||| | ||||| |||| Sbjct 736 ATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGT-----TGAAACATAAGGC 790 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | |||||||| || || | |||||| || ||||| || || || || || | | | | Sbjct 791 ATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAAC 850 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | |||| ||| ||||| | || | ||| ||||| || |||||| || || ||||| | Sbjct 851 CAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATA 910 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 | || || || || ||||| || | || | |||||||| Sbjct 911 TACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAA 950 >SEQ14824 Length=19491 Score = 87.8 bits (96), Expect = 3e-12 Identities = 225/340 (66%), Gaps = 7/340 (2%) Strand=Plus/Plus Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805 ||||| | || || ||||||||||| || | |||| | | || || || || || Sbjct 4952 AGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGG 5011 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || |||| | | ||| | | || ||||| || ||||| | || || || || | | Sbjct 5012 AGATTAACAGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATA 5071 Query 159866 ATCTGCGAGACACGTT-CGTACCCCGGC-TTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 || | | ||||| | || | | |||| | |||||| | ||||| |||| Sbjct 5072 ATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGT-----TGAAACATAAGGC 5126 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | |||||||| || || | |||||| || ||||| || || || || || | | | | Sbjct 5127 ATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAAC 5186 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | |||| ||| ||||| | || | ||| ||||| || |||||| || || ||||| | Sbjct 5187 CAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATA 5246 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 | || || || || ||||| || | || | |||||||| Sbjct 5247 TACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAA 5286 Score = 87.8 bits (96), Expect = 3e-12 Identities = 225/340 (66%), Gaps = 7/340 (2%) Strand=Plus/Plus Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805 ||||| | || || ||||||||||| || | |||| | | || || || || || Sbjct 11751 AGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGG 11810 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || |||| | | ||| | | || ||||| || ||||| | || || || || | | Sbjct 11811 AGATTAACAGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATA 11870 Query 159866 ATCTGCGAGACACGTT-CGTACCCCGGC-TTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 || | | ||||| | || | | |||| | |||||| | ||||| |||| Sbjct 11871 ATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGT-----TGAAACATAAGGC 11925 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | |||||||| || || | |||||| || ||||| || || || || || | | | | Sbjct 11926 ATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAAC 11985 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | |||| ||| ||||| | || | ||| ||||| || |||||| || || ||||| | Sbjct 11986 CAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATA 12045 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 | || || || || ||||| || | || | |||||||| Sbjct 12046 TACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAA 12085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794905302599520