Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 132 1e-25
SEQ18478 96.9 8e-15
seq9966 96.9 8e-15
seq5553 95.1 3e-14
seq2607 95.1 3e-14
>SEQ18352
Length=541547
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| | ||||||||| || |||||||||| ||||||||||| || ||
Sbjct 389377 CGTAGACGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGATAACGTG 389318
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| |||||| || ||||| || | |||||| ||||| || ||| |||
Sbjct 389317 CGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCT 389258
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| || || ||||| ||| ||| ||| | || || | || ||| || |||||
Sbjct 389257 TCTTTATCTTGGATCTTAGCCTTGACGTTTTCAATTGTATCAGATGGTTCAACTTCCAAT 389198
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || | ||| || || ||||||||
Sbjct 389197 GTAATGGTTTTGCCAGTCAAAGTCTTGACGAAAATTTG 389160
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| | ||||||||| ||||||||||||| ||||||||||| || ||
Sbjct 389833 CGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGATAAGGTA 389774
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| |||||||| || ||||| || | |||||| || || ||| ||| |||
Sbjct 389773 CGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCT 389714
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| || || ||||| || || ||| | |||||| | || || || || ||
Sbjct 389713 TCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAA 389654
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || | ||| || || || |||||
Sbjct 389653 GTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTG 389616
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| | ||||||||| ||||||||||||| ||||||||||| || ||
Sbjct 391201 CGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGATAAGGTA 391142
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| |||||||| || ||||| || | |||||| || || ||| ||| |||
Sbjct 391141 CGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCT 391082
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| || || ||||| || || ||| | |||||| | || || || || ||
Sbjct 391081 TCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAA 391022
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || | ||| || || || |||||
Sbjct 391021 GTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTG 390984
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| | ||||||||| || |||||||| | ||||||||| | | ||
Sbjct 389149 CGTAGACGCAAGACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTA 389090
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||| ||||| || || || || | ||| || ||||| || ||| |||
Sbjct 389089 CGCCCATCCTCCAATTGCTTACCAGCAAAAATTAAACGTTGTTGGTCTGGTGGAATACCT 389030
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| |||||||| || ||| || ||| | |||||| | || || || |||||
Sbjct 389029 TCCTTATCCTGAATTTTAGCCTTGACATTTTCAATGGTGTCGGATGGCTCGACTTCCAAA 388970
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| || | |||||||||||| |||||
Sbjct 388969 GTAATGGTTTTACCAGTCAAAGTTTTCACAAAGATTTG 388932
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || || || ||||| || | ||||||||||| || || | |||||||||| ||||
Sbjct 390499 TGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCTTCCAACTGC 390440
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || ||||| || | ||||||||| || || ||| || ||| || ||||| ||
Sbjct 390439 TTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGAATTTTA 390380
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| || ||| | || || | || ||| || ||||| || || || || || ||
Sbjct 390379 GCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTGCCAGTC 390320
Query 199607 AGAGTTTTCACAAAAATTTG 199626
| ||| || ||||| || ||
Sbjct 390319 AAAGTCTTGACAAAGATCTG 390300
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| || ||||| || | ||||| || | | ||| | ||||||||||| ||||| ||
Sbjct 400803 AGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTCCAATTGCTTACC 400744
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
||||| || | ||| || ||||| ||| ||| || ||| || |||||||| |||
Sbjct 400743 AGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTT 400684
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| || | ||||| | || ||| || |||||||| || || || || || | ||
Sbjct 400683 GACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAACGTAATTGTTTTGCCAGTCAAGGT 400624
Query 199612 TTTCACAAAAATTTG 199626
||| ||||| || ||
Sbjct 400623 TTTAACAAATATCTG 400609
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| || |||||||| | ||||| |||| | || | ||||||||||| || || ||
Sbjct 400347 AGTAGATTCCTTTTGAATATTGTAATCAGAGAGGGTACGTCCATCTTCCAATTGTTTACC 400288
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
||||| || | ||| || ||||| ||| ||| || ||| || |||||||| |||
Sbjct 400287 AGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTT 400228
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| || | ||||| | || ||| || ||||| || || || || || || | ||
Sbjct 400227 GACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATAGTTTTGCCAGTCAAGGT 400168
Query 199612 TTTCACAAAAATTTG 199626
||| ||||| || ||
Sbjct 400167 TTTAACAAATATCTG 400153
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| || ||||| || | ||||| || | | ||| | ||||||||||| ||||| ||
Sbjct 401715 AGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTCCAATTGCTTACC 401656
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
||||| || | ||| || ||||| ||| ||| || ||| || |||||||| |||
Sbjct 401655 AGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTT 401596
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| || | ||||| | || ||| || ||||| || || || || || || | ||
Sbjct 401595 GACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAATGTAATTGTTTTGCCAGTCAAGGT 401536
Query 199612 TTTCACAAAAATTTG 199626
||| ||||| || ||
Sbjct 401535 TTTAACAAATATCTG 401521
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || || || || || || | ||||||||||| | || | |||||||||| ||
Sbjct 402176 TGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAATTGT 402117
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || ||||| || | ||| || ||||| ||| ||| |||||| || ||||| ||
Sbjct 402116 TTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATCTTGAATTTTG 402057
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| ||| || | ||||| | || ||| || ||||| || || || || || ||
Sbjct 402056 GCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGTTTTGCCAGTC 401997
Query 199607 AGAGTTTTCACAAAAATTTG 199626
| ||||| ||||| || ||
Sbjct 401996 AAGGTTTTTACAAATATCTG 401977
>SEQ18478
Length=82247
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || |||||||||||||| | ||||||||| | || || | ||||||||| || |||
Sbjct 41436 TGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGATAAGGTGCGTCCATCTTCAAGTTGC 41495
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || ||||| || | ||| || || || || ||| || || || || || ||
Sbjct 41496 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATCTTGGATTTTA 41555
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
|||||| ||| | ||||| | | || || ||||| ||||| ||||| || ||
Sbjct 41556 GCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTC 41615
Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635
| |||||| || || || || ||||||
Sbjct 41616 AAAGTTTTAACGAATATCTG---CATTTT 41641
>seq9966
Length=18433
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || |||||||||||||| | ||||||||| | || || | ||||||||| || |||
Sbjct 14147 TGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGATAAGGTGCGTCCATCTTCAAGTTGC 14206
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || ||||| || | ||| || || || || ||| || || || || || ||
Sbjct 14207 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATCTTGGATTTTA 14266
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
|||||| ||| | ||||| | | || || ||||| ||||| ||||| || ||
Sbjct 14267 GCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTC 14326
Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635
| |||||| || || || || ||||||
Sbjct 14327 AAAGTTTTAACGAATATCTG---CATTTT 14352
>seq5553
Length=18996
Score = 95.1 bits (104), Expect = 3e-14
Identities = 165/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| || || || |||||||| | || || || | ||| || | |||||||||| ||
Sbjct 18562 GTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCTTCCAATTG 18503
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
|| || || || || | ||| ||||| || ||| |||||| ||| |||||||||||
Sbjct 18502 TTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTT 18443
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|| || ||||| ||||| | || ||| || || | ||||| ||||| |||||
Sbjct 18442 GGCTTTGACATTTTCGATAGTGTCCGATGGTTCAACCTCAAGGGTGATGGTCTTGCCCGT 18383
Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTTACTTTACGTATTTCTTAAAATA 199663
|| || || || || || || |||||| | ||||| | || | ||||||||
Sbjct 18382 TAGGGTCTTAACGAATATCTG---CATTTTGACGCAACTTT-CCTAATGATTAAAATA 18329
>seq2607
Length=223464
Score = 95.1 bits (104), Expect = 3e-14
Identities = 165/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| || || || |||||||| | || || || | ||| || | |||||||||| ||
Sbjct 124828 GTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCTTCCAATTG 124887
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
|| || || || || | ||| ||||| || ||| |||||| ||| |||||||||||
Sbjct 124888 TTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTT 124947
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|| || ||||| ||||| | || ||| || || | ||||| ||||| |||||
Sbjct 124948 GGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACCTCAAGGGTGATGGTCTTGCCCGT 125007
Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTTACTTTACGTATTTCTTAAAATA 199663
|| || || || || || || |||||| | ||||| | || | ||||||||
Sbjct 125008 TAGGGTCTTAACGAATATCTG---CATTTTGACGCAACTTT-CCTAATGATTAAAATA 125061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178541831774514
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