Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 132 1e-25 SEQ18478 96.9 8e-15 seq9966 96.9 8e-15 seq5553 95.1 3e-14 seq2607 95.1 3e-14 >SEQ18352 Length=541547 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| | ||||||||| || |||||||||| ||||||||||| || || Sbjct 389377 CGTAGACGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGATAACGTG 389318 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| |||||| || ||||| || | |||||| ||||| || ||| ||| Sbjct 389317 CGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCT 389258 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| ||| ||| | || || | || ||| || ||||| Sbjct 389257 TCTTTATCTTGGATCTTAGCCTTGACGTTTTCAATTGTATCAGATGGTTCAACTTCCAAT 389198 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || | ||| || || |||||||| Sbjct 389197 GTAATGGTTTTGCCAGTCAAAGTCTTGACGAAAATTTG 389160 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| | ||||||||| ||||||||||||| ||||||||||| || || Sbjct 389833 CGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGATAAGGTA 389774 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || ||||| || | |||||| || || ||| ||| ||| Sbjct 389773 CGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCT 389714 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| || || ||| | |||||| | || || || || || Sbjct 389713 TCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAA 389654 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || | ||| || || || ||||| Sbjct 389653 GTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTG 389616 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| | ||||||||| ||||||||||||| ||||||||||| || || Sbjct 391201 CGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGATAAGGTA 391142 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || ||||| || | |||||| || || ||| ||| ||| Sbjct 391141 CGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCT 391082 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| || || ||| | |||||| | || || || || || Sbjct 391081 TCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAA 391022 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || | ||| || || || ||||| Sbjct 391021 GTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTG 390984 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| | ||||||||| || |||||||| | ||||||||| | | || Sbjct 389149 CGTAGACGCAAGACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTA 389090 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| ||||| || || || || | ||| || ||||| || ||| ||| Sbjct 389089 CGCCCATCCTCCAATTGCTTACCAGCAAAAATTAAACGTTGTTGGTCTGGTGGAATACCT 389030 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||||| || ||| || ||| | |||||| | || || || ||||| Sbjct 389029 TCCTTATCCTGAATTTTAGCCTTGACATTTTCAATGGTGTCGGATGGCTCGACTTCCAAA 388970 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | |||||||||||| ||||| Sbjct 388969 GTAATGGTTTTACCAGTCAAAGTTTTCACAAAGATTTG 388932 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || ||||| || | ||||||||||| || || | |||||||||| |||| Sbjct 390499 TGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCTTCCAACTGC 390440 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || ||||| || | ||||||||| || || ||| || ||| || ||||| || Sbjct 390439 TTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGAATTTTA 390380 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || ||| | || || | || ||| || ||||| || || || || || || Sbjct 390379 GCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTGCCAGTC 390320 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||| || ||||| || || Sbjct 390319 AAAGTCTTGACAAAGATCTG 390300 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || ||||| || | ||||| || | | ||| | ||||||||||| ||||| || Sbjct 400803 AGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTCCAATTGCTTACC 400744 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||| || | ||| || ||||| ||| ||| || ||| || |||||||| ||| Sbjct 400743 AGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTT 400684 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| || | ||||| | || ||| || |||||||| || || || || || | || Sbjct 400683 GACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAACGTAATTGTTTTGCCAGTCAAGGT 400624 Query 199612 TTTCACAAAAATTTG 199626 ||| ||||| || || Sbjct 400623 TTTAACAAATATCTG 400609 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || |||||||| | ||||| |||| | || | ||||||||||| || || || Sbjct 400347 AGTAGATTCCTTTTGAATATTGTAATCAGAGAGGGTACGTCCATCTTCCAATTGTTTACC 400288 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||| || | ||| || ||||| ||| ||| || ||| || |||||||| ||| Sbjct 400287 AGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTT 400228 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| || | ||||| | || ||| || ||||| || || || || || || | || Sbjct 400227 GACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATAGTTTTGCCAGTCAAGGT 400168 Query 199612 TTTCACAAAAATTTG 199626 ||| ||||| || || Sbjct 400167 TTTAACAAATATCTG 400153 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || ||||| || | ||||| || | | ||| | ||||||||||| ||||| || Sbjct 401715 AGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTCCAATTGCTTACC 401656 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||| || | ||| || ||||| ||| ||| || ||| || |||||||| ||| Sbjct 401655 AGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTGAATCTTGGCCTT 401596 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| || | ||||| | || ||| || ||||| || || || || || || | || Sbjct 401595 GACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAATGTAATTGTTTTGCCAGTCAAGGT 401536 Query 199612 TTTCACAAAAATTTG 199626 ||| ||||| || || Sbjct 401535 TTTAACAAATATCTG 401521 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || || || || | ||||||||||| | || | |||||||||| || Sbjct 402176 TGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAATTGT 402117 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || ||||| || | ||| || ||||| ||| ||| |||||| || ||||| || Sbjct 402116 TTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATCTTGAATTTTG 402057 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | ||||| | || ||| || ||||| || || || || || || Sbjct 402056 GCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGTTTTGCCAGTC 401997 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||||| ||||| || || Sbjct 401996 AAGGTTTTTACAAATATCTG 401977 >SEQ18478 Length=82247 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||||||||| | ||||||||| | || || | ||||||||| || ||| Sbjct 41436 TGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGATAAGGTGCGTCCATCTTCAAGTTGC 41495 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || ||||| || | ||| || || || || ||| || || || || || || Sbjct 41496 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATCTTGGATTTTA 41555 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 |||||| ||| | ||||| | | || || ||||| ||||| ||||| || || Sbjct 41556 GCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTC 41615 Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635 | |||||| || || || || |||||| Sbjct 41616 AAAGTTTTAACGAATATCTG---CATTTT 41641 >seq9966 Length=18433 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||||||||| | ||||||||| | || || | ||||||||| || ||| Sbjct 14147 TGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGATAAGGTGCGTCCATCTTCAAGTTGC 14206 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || ||||| || | ||| || || || || ||| || || || || || || Sbjct 14207 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATCTTGGATTTTA 14266 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 |||||| ||| | ||||| | | || || ||||| ||||| ||||| || || Sbjct 14267 GCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTC 14326 Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635 | |||||| || || || || |||||| Sbjct 14327 AAAGTTTTAACGAATATCTG---CATTTT 14352 >seq5553 Length=18996 Score = 95.1 bits (104), Expect = 3e-14 Identities = 165/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || |||||||| | || || || | ||| || | |||||||||| || Sbjct 18562 GTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCTTCCAATTG 18503 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || || || | ||| ||||| || ||| |||||| ||| ||||||||||| Sbjct 18502 TTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTT 18443 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||||| ||||| | || ||| || || | ||||| ||||| ||||| Sbjct 18442 GGCTTTGACATTTTCGATAGTGTCCGATGGTTCAACCTCAAGGGTGATGGTCTTGCCCGT 18383 Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTTACTTTACGTATTTCTTAAAATA 199663 || || || || || || || |||||| | ||||| | || | |||||||| Sbjct 18382 TAGGGTCTTAACGAATATCTG---CATTTTGACGCAACTTT-CCTAATGATTAAAATA 18329 >seq2607 Length=223464 Score = 95.1 bits (104), Expect = 3e-14 Identities = 165/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || |||||||| | || || || | ||| || | |||||||||| || Sbjct 124828 GTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCTTCCAATTG 124887 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || || || | ||| ||||| || ||| |||||| ||| ||||||||||| Sbjct 124888 TTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTT 124947 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||||| ||||| | || ||| || || | ||||| ||||| ||||| Sbjct 124948 GGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACCTCAAGGGTGATGGTCTTGCCCGT 125007 Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTTACTTTACGTATTTCTTAAAATA 199663 || || || || || || || |||||| | ||||| | || | |||||||| Sbjct 125008 TAGGGTCTTAACGAATATCTG---CATTTTGACGCAACTTT-CCTAATGATTAAAATA 125061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178541831774514