Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq9966 131 2e-25
SEQ18478 125 8e-24
SEQ18352 113 5e-20
>seq9966
Length=18433
Score = 131 bits (144), Expect = 2e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | |||||||||||||| ||| | ||| ||||||||| || ||||||||||||
Sbjct 14123 CCTCCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGAT 14182
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||||| | || || || |||||||| ||||| ||||| || || || || | ||
Sbjct 14183 AAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 14242
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||| || ||| || ||| | | | | |||||| | || ||
Sbjct 14243 ATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACT 14302
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
|||| ||||| || ||||| |||| |||||||| || || ||||||||||
Sbjct 14303 TCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTTGC 14354
>SEQ18478
Length=82247
Score = 125 bits (138), Expect = 8e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | |||||||||||||| ||| | ||| ||||||||| || ||||||||||||
Sbjct 41412 CCACCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGAT 41471
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||||| | || || || |||||||| ||||| ||||| || || || || | ||
Sbjct 41472 AAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 41531
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||| || ||| || ||| | | | | |||||| | || ||
Sbjct 41532 ATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACT 41591
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
|||| ||||| || ||||| |||| |||||||| || || ||||||||||
Sbjct 41592 TCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTTGC 41643
>SEQ18352
Length=541547
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || ||| || |||| |||||| ||| ||||| || |||||||| |||||
Sbjct 400832 CCGCCACGTAGACGTAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAG 400773
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || | || || | ||||| || ||||| ||||| || || ||||| | ||
Sbjct 400772 AGAGTACGTCCATCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGA 400713
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| || || ||||| ||||| || | | ||||| | ||| ||
Sbjct 400712 ATGCCCTCTTTATCTTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACT 400653
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| ||| || |||||||| |||| ||||||||||| || |||||
Sbjct 400652 TCCAACGTAATTGTTTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 400606
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || ||| || |||| |||||| ||| ||||| || |||||||| |||||
Sbjct 401744 CCGCCACGTAGACGTAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAG 401685
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || | || || | ||||| || ||||| ||||| || || ||||| | ||
Sbjct 401684 AGAGTACGTCCATCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGA 401625
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| || || ||||| ||||| || | | ||||| | ||| ||
Sbjct 401624 ATGCCCTCTTTATCTTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACT 401565
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || |||||||| |||| ||||||||||| || |||||
Sbjct 401564 TCCAATGTAATTGTTTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 401518
Score = 104 bits (114), Expect = 3e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || ||| || |||| |||||| ||| |||||||| |||||||| || ||
Sbjct 400376 CCGCCACGTAGACGTAATACCAAATGCAAAGTAGATTCCTTTTGAATATTGTAATCAGAG 400317
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || || | || || || ||||| ||||| || || ||||| | ||
Sbjct 400316 AGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGA 400257
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| || || ||||| ||||| || | | |||||| | ||| ||
Sbjct 400256 ATGCCCTCTTTATCTTGAATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACT 400197
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || |||||||| |||| ||||||||||| || |||||
Sbjct 400196 TCCAATGTAATAGTTTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 400150
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || |||||| |||| || | ||| ||||||||||| |||||||| |||
Sbjct 389383 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 389324
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||||| | || || | |||||| || ||||| ||||| ||||| ||||| | ||
Sbjct 389323 AACGTGCGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 389264
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || || || || |||||| ||||| | | | || || | ||| ||
Sbjct 389263 ATGCCTTCTTTATCTTGGATCTTAGCCTTGACGTTTTCAATTGTATCAGATGGTTCAACT 389204
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || ||||||||||| |||| || || || || ||||||||
Sbjct 389203 TCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAAATTTGCAT 389157
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || |||||| |||| || | ||| |||||||||||| |||||||| |||
Sbjct 389839 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAT 389780
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || || | || || ||||||||||| ||||| ||||| ||||| || || | ||
Sbjct 389779 AAGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGA 389720
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || ||||| |||||| |||| | | | ||||| | || ||
Sbjct 389719 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACC 389660
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | || ||||||||||| |||| || || || |||||||||||
Sbjct 389659 TCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 389613
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || |||||| |||| || | ||| |||||||||||| |||||||| |||
Sbjct 391207 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAT 391148
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || || | || || ||||||||||| ||||| ||||| ||||| || || | ||
Sbjct 391147 AAGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGA 391088
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || ||||| |||||| |||| | | | ||||| | || ||
Sbjct 391087 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACC 391028
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | || ||||||||||| |||| || || || |||||||||||
Sbjct 391027 TCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 390981
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || |||||| |||| || | ||| || || ||||| |||||||||||
Sbjct 390067 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCGGAC 390008
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||| || | || || ||||||||||| ||||| ||||| |||||||| || | ||
Sbjct 390007 AAAGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGTGGA 389948
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || || ||||| ||| || ||| | | | | || || | ||| ||
Sbjct 389947 ATGCCTTCTTTGTCTTGGATTTTAGCCTTAACATTTTCAATTGTATCAGATGGTTCAACC 389888
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || ||||||||||| |||| || || || ||||| |||||
Sbjct 389887 TCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389841
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || ||| || |||| |||||| ||| ||||| || |||||||| |||||
Sbjct 401288 CCGCCACGTAGACGTAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAG 401229
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || | || || || || |||||||| || || ||||| | ||
Sbjct 401228 AGGGTGCGACCATCTTCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAGGA 401169
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| ||||| || || ||||| || | | | || | ||| ||
Sbjct 401168 ATGCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACT 401109
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | || ||||| ||||| ||||| ||||||||||| || |||||
Sbjct 401108 TCTAGTGTAATGGTCTTGCCGGTCAGGGTTTTAACAAATATCTGCAT 401062
Score = 89.7 bits (98), Expect = 6e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || ||| || |||| ||| | ||| ||||| || || |||||||| |||
Sbjct 390523 CCACCACGTAGACGTAATACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGAT 390464
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || || | || || | |||||| || ||||| ||||| |||||||| || | ||
Sbjct 390463 AAGGTACGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGA 390404
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| ||||| || || ||||| | | | || || | ||| ||
Sbjct 390403 ATGCCCTCTTTGTCTTGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACT 390344
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || ||||||||||| |||| || || |||||||| |||||
Sbjct 390343 TCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 390297
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || |||||| |||| || | || |||||||| || |||||||||||
Sbjct 389155 CCACCACGTAGACGCAAGACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAG 389096
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || ||| | || || | ||||| || || || || || || || ||||| | ||
Sbjct 389095 AGGGTACGCCCATCCTCCAATTGCTTACCAGCAAAAATTAAACGTTGTTGGTCTGGTGGA 389036
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | ||||| ||| || || ||||| | | | |||||| | || ||
Sbjct 389035 ATACCTTCCTTATCCTGAATTTTAGCCTTGACATTTTCAATGGTGTCGGATGGCTCGACT 388976
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|||| || |||||||| || |||| ||||| |||||||||||||| |||
Sbjct 388975 TCCAAAGTAATGGTTTTACCAGTCAAAGTTTTCACAAAGATTTGCATGTTG 388925
Score = 86.0 bits (94), Expect = 7e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || |||||| |||| ||| || ||| ||||||||||| ||||| |||||
Sbjct 389611 CCACCACGTAGACGCAATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAG 389552
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || | || || || || ||||| || || || || || || || || | ||
Sbjct 389551 AGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 389492
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || ||||| ||||| |||| | | | ||||| | || ||
Sbjct 389491 ATACCTTCTTTGTCTTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACC 389432
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||||||||| |||| || || || ||||| |||||
Sbjct 389431 TCCAAAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389385
Score = 86.0 bits (94), Expect = 7e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||| |||| ||| | ||| ||||| || || || ||||| || | ||||| |
Sbjct 391423 CGCAAGACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAGTCAGACAAGGTGCGACCA 391364
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || | |||||| || ||||| ||||| |||||||| || | || | || ||| |||
Sbjct 391363 TCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTG 391304
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
|| |||||| || | | | | ||||| | ||| || |||| || |||
Sbjct 391303 TCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATG 391244
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||| |||| || || || ||||| |||||
Sbjct 391243 GTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 391209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565060759701840
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