Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8547 95.1 1e-14 >seq8547 Length=35786 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 168488 ACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTTGTTTGAACCCGTGTAGTC 168547 ||| |||||||||||||||| |||||||| | ||||| ||||| || || ||| Sbjct 8550 ACGTGTACCAAATTGACCACGAGGTTCAAGCAAATTAATATTGTTGGATCCAACAAAGTT 8609 Query 168548 GTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACTTCACCATGGTGGTACGCAGACTT 168607 | ||||| || ||||| || ||| ||||||||||||||||| || || ||| | Sbjct 8610 TTGAGCCAAATTTACAATTGTCATTTGTAATGATACTTCACCATGGTGATATGCTGACAT 8669 Query 168608 GTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCATCCTTGAGATTCTTA---TG 168664 || || || | | | | |||||| || || | ||| | ||| || ||| | Sbjct 8670 TTCAGCTACGGAACCAGATAATTGTGCTACTTTAACTTCCTTCTT---ATCGTTACGTTT 8726 Query 168665 GAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACCATCCGCCATA 168716 || || | | |||| ||||||||||| |||||| | |||||| ||||| Sbjct 8727 AAAACATGTAAACATAACTTTCCTCTGACCAGGCTTAAAACCATCTACCATA 8778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589795383784080