Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18371 111 2e-19
seq4733 98.7 1e-15
>SEQ18371
Length=67641
Score = 111 bits (122), Expect = 2e-19
Identities = 359/538 (67%), Gaps = 22/538 (4%)
Strand=Plus/Plus
Query 159253 GACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAAC 159312
|| ||| ||||| |||||||| || || || | ||| ||||| || ||||||||
Sbjct 52517 GAATTAGAGAAAGATTTATGTGAAATTACTGGTTACGATAGAATATCCTTCCAACCTAAT 52576
Query 159313 GCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCA-AGCATACCATCAAGGATC 159371
||||| | || ||||| || || || | || || | ||| || ||| || | |
Sbjct 52577 TCAGGAGCTCAAGGTGAATACGCTGGTTTACGCGCTATTCGTAGC-TATCATGAAC-ACC 52634
Query 159372 AGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTG 159430
| || | | | | ||| ||||| | || ||| || |||||||| || |||||||
Sbjct 52635 GTAATGAAGGTCATCGCAATATATGTCTCATTCCAATATCGGCACATGGCACAAATCCTG 52694
Query 159431 CATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT--GATGGCAA 159488
| || ||| ||||| || |||||||| | | | | || | || || || || |
Sbjct 52695 CTTCCGCACAAATGGCTGGTATGAAAGTGGAACCCAT-ACGTAT-ATTATCTGACGGTAG 52752
Query 159489 CATAGACATCAAAGATCTA---GAGAAGAAAGCA-ATCATGAATACATTTGAACTGTCAT 159544
||| || || | || || || ||| || | |||||| | | ||||| || |
Sbjct 52753 CATTGATATGAGTCATTTACGTGATAAGGCCGCTGAACATGAA-AGA---GAACTTTCTT 52808
Query 159545 GTATTATGATTACATATCCATCTACACAT-GGTGTATTTGAAACAAACATCAGACAGATA 159603
| |||||||||||||||| || || ||| || || |||| | |||| | ||||||
Sbjct 52809 GCCTTATGATTACATATCCCTCAAC-CATGGGCGTTTTTG-AGGAAAC-TGTTGCAGATA 52865
Query 159604 TGTAAGATT--GTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATG 159661
| | |||| | ||| |||| || || || ||| | |||||||| || | ||||
Sbjct 52866 TTTGTGATTTAATACATCGTCATGGAGGACAAGTGTATTTAGATGGTGCTAACATGAATG 52925
Query 159662 CACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTAC 159721
|||| || || || | ||| | || || || ||||| | ||| | || || |
Sbjct 52926 CACAAGTTGGACTTTGCAGACCCGGCGATTACGGCAGCGATGTTTCTCACTTGAATTTGC 52985
Query 159722 ATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|||| || ||||| || |||||||| ||||| |||||||| | ||||| || |||||
Sbjct 52986 ATAAAACTTTCTGCATACCACATGGTGGTGGTGGTCCTGGTATGGGTCCCATAGGTGT 53043
Score = 93.3 bits (102), Expect = 5e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 158551 GATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGA 158610
|||| || ||| || | || ||| | ||||| ||||||| | ||||| || || |
Sbjct 51785 GATATGGATGGTCATGATGCTTACCGTTTAGCTTTACAGACACGTGAGCAACACATACGT 51844
Query 158611 AGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGG 158670
| || || || |||||||| || || || ||||||||||| || ||||||||||| |
Sbjct 51845 CGTGATAAGGCGACCAGTAATATTTGTACTGCACAAGCACTCCTAGCTAATATGTCAGCA 51904
Query 158671 TTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCAA 158716
| ||||| ||||||||| | || ||||| | || |||||||
Sbjct 51905 ATGTATGCTATATATCATGGCCCTGAAGGACTTAAAGCCATAGCAA 51950
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 157921 ATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCT 157980
|||| ||| ||| | |||| |||||| | ||| |||| || || ||||||||| ||
Sbjct 51026 ATACTGCGTAACATCTTTGAAAATCCTGGCTGGACCACACAATATACACCCTATCAACCT 51085
Query 157981 GAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTC 158040
|||||| |||| || | | ||| | ||| | || || || || | || | |||||
Sbjct 51086 GAGATAGCTCAAGGCCGTCTTGAATCATTACTGAACTATCAGACATTAGTCTCCGAACTG 51145
Query 158041 ACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCA 158100
||||| | | || || ||||| |||| ||||||| || ||||| |||||||||
Sbjct 51146 ACAGGTTTGGATGTGGCTAATGCATCATTATTGGATGAAGGTACAGCAGCTGCAGAAGCA 51205
Query 158101 ATG 158103
|||
Sbjct 51206 ATG 51208
>seq4733
Length=8201
Score = 98.7 bits (108), Expect = 1e-15
Identities = 355/538 (66%), Gaps = 22/538 (4%)
Strand=Plus/Plus
Query 159253 GACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAAC 159312
|| ||| ||||| |||||||| || || || | || ||||| || ||||||||
Sbjct 6530 GAATTAGAGAAAGATTTATGTGAAATTACTGGTTACGAAAGAATATCCTTCCAACCTAAT 6589
Query 159313 GCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCA-AGCATACCATCAAGGATC 159371
||||| | || ||||| || || || | || || | ||| || ||| | | | |
Sbjct 6590 TCAGGAGCTCAAGGTGAATACGCTGGTTTACGCGCTATTCGTAGC-TATCATGA-GCACC 6647
Query 159372 AGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTG 159430
| || | | | | ||| ||||| | || ||| || || ||||| || |||||||
Sbjct 6648 GTAATGAAGGTCATCGCAATATATGTCTCATTCCAATATCGGCGCATGGCACAAATCCTG 6707
Query 159431 CATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT--GATGGCAA 159488
| || ||| ||||| || |||||||| | | | | || | || || || || |
Sbjct 6708 CTTCCGCACAAATGGCTGGTATGAAAGTGGAACCCAT-ACGTAT-ATTATCTGACGGTAG 6765
Query 159489 CATAGACATCAAAGATCTAGAGAAGAAAGCA----ATCATGAATACATTTGAACTGTCAT 159544
||| || || | || || | ||||| | |||||| | | ||||| || |
Sbjct 6766 CATTGATATGAGTCATTTACGTGATAAAGCCGCTGAACATGAA-AGA---GAACTTTCTT 6821
Query 159545 GTATTATGATTACATATCCATCTACACAT-GGTGTATTTGAAACAAACATCAGACAGATA 159603
| ||||||||||||| || || || ||| || || |||| | |||| | ||||||
Sbjct 6822 GCCTTATGATTACATACCCCTCAAC-CATGGGCGTTTTTG-AGGAAAC-TGTTGCAGATA 6878
Query 159604 TGTAAGATT--GTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATG 159661
| | |||| | ||| |||| || || || ||| | |||||||| || | ||||
Sbjct 6879 TTTGTGATTTAATACATCGTCATGGAGGACAAGTGTATTTAGATGGTGCTAACATGAATG 6938
Query 159662 CACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTAC 159721
|||| || || || | ||| | || || || ||||| | ||| | || || |
Sbjct 6939 CACAAGTTGGACTTTGCAGACCCGGCGATTACGGCAGCGATGTTTCTCACTTGAATTTGC 6998
Query 159722 ATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|||| || ||||| || |||||||| ||||| |||||||| | ||||| || |||||
Sbjct 6999 ATAAAACTTTCTGCATACCACATGGTGGTGGTGGTCCTGGTATGGGTCCCATAGGTGT 7056
Score = 87.8 bits (96), Expect = 2e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 158551 GATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGA 158610
|||| || || || | || ||| | ||||| ||||||| | ||||| || || |
Sbjct 5798 GATATGGATGGCCATGATGCTTACCGTTTAGCTTTACAGACACGTGAGCAACACATACGT 5857
Query 158611 AGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGG 158670
| || || || |||||||| || || || ||||||||||| || ||||||||||| |
Sbjct 5858 CGTGATAAGGCGACCAGTAATATTTGTACTGCACAAGCACTCCTAGCTAATATGTCAGCA 5917
Query 158671 TTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCAA 158716
| ||||| ||||||||| | || ||||| | || |||||||
Sbjct 5918 ATGTATGCTATATATCATGGCCCTGAAGGACTTAAAGCCATAGCAA 5963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587866390209120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |