Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 105 4e-18 >SEQ18352 Length=541547 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| |||| Sbjct 401957 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 401898 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||| ||||| ||||||||||| | ||||| |||||| | || | ||||| ||||| Sbjct 401897 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCT 401838 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || |||||| | || ||| | || || || | ||| || ||| Sbjct 401837 TGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACCTCTAAGGTGATCGTT 401778 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | |||||| || || ||||||||| Sbjct 401777 TTGCCTGTTAAAGTCTTAACGAAAATCTGCATA 401745 Score = 104 bits (114), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 12/219 (5%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| |||| Sbjct 400133 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 400074 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||| ||||| ||||||||||| | ||||| || ||| | || | ||||| ||||| Sbjct 400073 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 400014 Query 34890 CTAATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTT 34943 ||| || || ||| |||||||| ||| | || || || | ||| Sbjct 400013 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTG 399960 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || | |||||| ||||| ||||||||| Sbjct 399959 ATAGTTTTGCCTGTCAAAGTCTTTACAAAAATCTGCATA 399921 Score = 100 bits (110), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 12/219 (5%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| |||| Sbjct 400589 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 400530 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||| ||||| ||||||||||| | ||||| || ||| | || | ||||| ||||| Sbjct 400529 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 400470 Query 34890 CTAATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTT 34943 ||| || || ||| |||||||| ||| | || || || | ||| Sbjct 400469 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTG 400416 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || | |||||| || || ||||||||| Sbjct 400415 ATCGTTTTGCCTGTTAAAGTCTTAACGAAAATCTGCATA 400377 Score = 100 bits (110), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 12/219 (5%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| |||| Sbjct 401501 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 401442 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||| ||||| ||||||||||| | ||||| || ||| | || | ||||| ||||| Sbjct 401441 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 401382 Query 34890 CTAATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTT 34943 ||| || || ||| |||||||| ||| | || || || | ||| Sbjct 401381 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTG 401328 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || | |||||| || || ||||||||| Sbjct 401327 ATCGTTTTGCCTGTTAAAGTCTTAACGAAAATCTGCATA 401289 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || ||||| |||| |||| ||| ||||| ||||| ||||| || | | | || |||| Sbjct 390508 AATACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCT 390449 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||| ||| || || || || || | || ||||| ||| | || | ||||| ||||| Sbjct 390448 TCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCT 390389 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || ||||| | | || | ||| | ||||| || | || |||||| Sbjct 390388 TGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTT 390329 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | |||||| ||||||||||||||| Sbjct 390328 TTGCCAGTCAAAGTCTTGACAAAGATCTGCATA 390296 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| ||||| |||| ||| ||| ||||||||||||||||| || | | | || |||| Sbjct 391421 CAAGACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAGTCAGACAAGGTGCGACCATC 391362 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| ||| || || || || || | || ||||| ||| | || | ||||| ||||| Sbjct 391361 TTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTC 391302 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||| || | | || | ||| | ||||| || | || ||||| Sbjct 391301 TTGGATCTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATGGT 391242 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||| || || | ||||| || |||||||||||| Sbjct 391241 TTTGCCAGTCAAGGTCTTTACGAAGATCTGCATA 391208 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| || || | || |||| || || ||||| || ||||| Sbjct 399885 TTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAA 399826 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||||| ||||| || ||| |||| | || || ||||| ||| || ||| || Sbjct 399825 GATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCTTGAATTTTAGATTTTACATT 399766 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| | || | || || || | || ||||||||||| || | ||| || || Sbjct 399765 TTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTTGAC 399706 Query 34970 AAAGATCTGCATA 34982 ||| ||||||||| Sbjct 399705 AAATATCTGCATA 399693 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 12/218 (6%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||| || |||||||| || |||||| | || |||| || Sbjct 399446 ACCAAGTGTAAAGTGGATTCTTTTTGTATGTTATAATCAGAAAGGGTGCGACCATCTTCA 399387 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || || || |||||||||| ||||| || ||| | || | || || ||||| | Sbjct 399386 AGTTGCTTACCAGCAAATATTAAGCGTTGTTGATCTGGTGGAATGCCTTCTTTGTCCTGA 399327 Query 34893 ATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTTATG 34946 || || || || ||||||||| ||| | || || || | || ||| Sbjct 399326 ATTTTTGCCTTAACATTTTCGATGCTATCAGAT------GGTTCCACCTCCAAAGTGATG 399273 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||| || || | |||||||| ||||||||||| || Sbjct 399272 GTTTTGCCTGTTAATGTCTTCACGAAGATCTGCATTTT 399235 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| || |||||||| ||||| || ||| | || |||| Sbjct 389141 CAAGACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGCCCATC 389082 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || || || ||||| |||| ||||| |||||| | || | || ||||| || Sbjct 389081 CTCCAATTGCTTACCAGCAAAAATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 389022 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || ||||| | | || | || | ||| || || | || ||||| Sbjct 389021 CTGAATTTTAGCCTTGACATTTTCAATGGTGTCGGATGGCTCGACTTCCAAAGTAATGGT 388962 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| || || | ||| ||||||||||| ||||| || Sbjct 388961 TTTACCAGTCAAAGTTTTCACAAAGATTTGCATGTT 388926 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||| ||| |||||||||||||| || || | | || | || || Sbjct 399675 AACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAATCAGACAAAGTACGACCGTCTTC 399616 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || |||||||||| || || |||||| | || | || || || || Sbjct 399615 AAGTTGCTTGCCAGCAAATATTAAACGCTGTTGGTCTGGAGGAATACCTTCTTTATCTTG 399556 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || || || | |||| | ||| || ||||| || | ||||||||||| Sbjct 399555 GATTTTGGCCTTAACATTTTCTATTGTATCAGATGCTTCAACTTCCAATGTTATGGTTTT 399496 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| || |||||||||||||| Sbjct 399495 GCCAGTTAAAGTTTTAACAAAGATCTGCAT 399466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324534126380976