Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 105 4e-18
>SEQ18352
Length=541547
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| ||||
Sbjct 401957 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 401898
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||| ||||| ||||||||||| | ||||| |||||| | || | ||||| |||||
Sbjct 401897 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCT 401838
Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||| || |||||| | || ||| | || || || | ||| || |||
Sbjct 401837 TGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACCTCTAAGGTGATCGTT 401778
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || | |||||| || || |||||||||
Sbjct 401777 TTGCCTGTTAAAGTCTTAACGAAAATCTGCATA 401745
Score = 104 bits (114), Expect = 2e-17
Identities = 155/219 (71%), Gaps = 12/219 (5%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| ||||
Sbjct 400133 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 400074
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||| ||||| ||||||||||| | ||||| || ||| | || | ||||| |||||
Sbjct 400073 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 400014
Query 34890 CTAATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTT 34943
||| || || ||| |||||||| ||| | || || || | |||
Sbjct 400013 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTG 399960
Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| || || | |||||| ||||| |||||||||
Sbjct 399959 ATAGTTTTGCCTGTCAAAGTCTTTACAAAAATCTGCATA 399921
Score = 100 bits (110), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 12/219 (5%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| ||||
Sbjct 400589 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 400530
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||| ||||| ||||||||||| | ||||| || ||| | || | ||||| |||||
Sbjct 400529 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 400470
Query 34890 CTAATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTT 34943
||| || || ||| |||||||| ||| | || || || | |||
Sbjct 400469 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTG 400416
Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| || || | |||||| || || |||||||||
Sbjct 400415 ATCGTTTTGCCTGTTAAAGTCTTAACGAAAATCTGCATA 400377
Score = 100 bits (110), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 12/219 (5%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| ||||| |||| |||| ||| ||||||||||| || || ||||| | ||| ||||
Sbjct 401501 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 401442
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||| ||||| ||||||||||| | ||||| || ||| | || | ||||| |||||
Sbjct 401441 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 401382
Query 34890 CTAATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTT 34943
||| || || ||| |||||||| ||| | || || || | |||
Sbjct 401381 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTG 401328
Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| || || | |||||| || || |||||||||
Sbjct 401327 ATCGTTTTGCCTGTTAAAGTCTTAACGAAAATCTGCATA 401289
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| ||||| |||| |||| ||| ||||| ||||| ||||| || | | | || ||||
Sbjct 390508 AATACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCT 390449
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||| ||| || || || || || | || ||||| ||| | || | ||||| |||||
Sbjct 390448 TCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCT 390389
Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||| || ||||| | | || | ||| | ||||| || | || ||||||
Sbjct 390388 TGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTT 390329
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || | |||||| |||||||||||||||
Sbjct 390328 TTGCCAGTCAAAGTCTTGACAAAGATCTGCATA 390296
Score = 93.3 bits (102), Expect = 3e-14
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| ||||| |||| ||| ||| ||||||||||||||||| || | | | || ||||
Sbjct 391421 CAAGACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAGTCAGACAAGGTGCGACCATC 391362
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||| ||| || || || || || | || ||||| ||| | || | ||||| |||||
Sbjct 391361 TTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTC 391302
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| ||| || | | || | ||| | ||||| || | || |||||
Sbjct 391301 TTGGATCTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATGGT 391242
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||| || || | ||||| || ||||||||||||
Sbjct 391241 TTTGCCAGTCAAGGTCTTTACGAAGATCTGCATA 391208
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||||||||| ||||| || || | || |||| || || ||||| || |||||
Sbjct 399885 TTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAA 399826
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
||||| ||||| || ||| |||| | || || ||||| ||| || ||| ||
Sbjct 399825 GATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCTTGAATTTTAGATTTTACATT 399766
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| | || | || || || | || ||||||||||| || | ||| || ||
Sbjct 399765 TTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTTGAC 399706
Query 34970 AAAGATCTGCATA 34982
||| |||||||||
Sbjct 399705 AAATATCTGCATA 399693
Score = 89.7 bits (98), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 12/218 (6%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| |||||| || |||||||| || |||||| | || |||| ||
Sbjct 399446 ACCAAGTGTAAAGTGGATTCTTTTTGTATGTTATAATCAGAAAGGGTGCGACCATCTTCA 399387
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| || || || |||||||||| ||||| || ||| | || | || || ||||| |
Sbjct 399386 AGTTGCTTACCAGCAAATATTAAGCGTTGTTGATCTGGTGGAATGCCTTCTTTGTCCTGA 399327
Query 34893 ATCTTCTGTTTGACG-----GATGCTATC-GATTCACCGGCCTCAACATCGACGGTTATG 34946
|| || || || ||||||||| ||| | || || || | || |||
Sbjct 399326 ATTTTTGCCTTAACATTTTCGATGCTATCAGAT------GGTTCCACCTCCAAAGTGATG 399273
Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||||| || || | |||||||| ||||||||||| ||
Sbjct 399272 GTTTTGCCTGTTAATGTCTTCACGAAGATCTGCATTTT 399235
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||| | || ||| || |||||||| ||||| || ||| | || ||||
Sbjct 389141 CAAGACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGCCCATC 389082
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||| || || || ||||| |||| ||||| |||||| | || | || ||||| ||
Sbjct 389081 CTCCAATTGCTTACCAGCAAAAATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 389022
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||| || ||||| | | || | || | ||| || || | || |||||
Sbjct 389021 CTGAATTTTAGCCTTGACATTTTCAATGGTGTCGGATGGCTCGACTTCCAAAGTAATGGT 388962
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||| || || | ||| ||||||||||| ||||| ||
Sbjct 388961 TTTACCAGTCAAAGTTTTCACAAAGATTTGCATGTT 388926
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
|||||| |||| ||| ||| |||||||||||||| || || | | || | || ||
Sbjct 399675 AACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAATCAGACAAAGTACGACCGTCTTC 399616
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|| || || || |||||||||| || || |||||| | || | || || || ||
Sbjct 399615 AAGTTGCTTGCCAGCAAATATTAAACGCTGTTGGTCTGGAGGAATACCTTCTTTATCTTG 399556
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
|| || || || | |||| | ||| || ||||| || | |||||||||||
Sbjct 399555 GATTTTGGCCTTAACATTTTCTATTGTATCAGATGCTTCAACTTCCAATGTTATGGTTTT 399496
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || | ||| || ||||||||||||||
Sbjct 399495 GCCAGTTAAAGTTTTAACAAAGATCTGCAT 399466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324534126380976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |