Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19160 89.7 7e-13
SEQ18560 89.7 7e-13
>SEQ19160
Length=94237
Score = 89.7 bits (98), Expect = 7e-13
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 126601 AAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTATGATTTAT 126659
||||||| ||||| ||| |||| | |||||| ||||||||||||| ||||| |||
Sbjct 70090 AAATTGGCGACAAGTTTGCTTCTCGTCATGGCC-AAAAAGGAACTTGCGGTATTCAATAT 70032
Query 126660 GCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTATAATTAATCCA 126719
|| ||||||||||| |||||| | || || |||||||||||||| || |||||
Sbjct 70031 CGGCACGAAGATATGCCTTTTACAAAGGACGGGATTACCCCCGATATTATCATAAATCCT 69972
Query 126720 AATTGTATACCGTCAAGAATGACCAT 126745
|| ||| || || | ||||| ||
Sbjct 69971 CATGCTATTCCATCTCGTATGACAAT 69946
Score = 84.2 bits (92), Expect = 3e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 126952 TAGGTCCAACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAA 127011
|||||||||| |||||||| || |||||||||||||| |||| ||||| ||||| |
Sbjct 69644 TAGGTCCAACGTACTATCAGCGACTTAAACATATGGTGGAAGACAAAATTCATGCACGTT 69585
Query 127012 GTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTG 127071
|| || | || || ||| ||| ||||||| |||| | | | |||||||
Sbjct 69584 CTCGCGGACCCGTGCAAATTTTAGTTCGGCAACCAATGGATGGTAGAGCACGCGGTGGTG 69525
Query 127072 GATTAAGATTTGGAGAAATGGAAAAAGATTG 127102
| ||| | ||||| ||||||||| |||||
Sbjct 69524 GTTTACGTTTTGGTGAAATGGAACGTGATTG 69494
>SEQ18560
Length=475018
Score = 89.7 bits (98), Expect = 7e-13
Identities = 100/131 (76%), Gaps = 2/131 (2%)
Strand=Plus/Minus
Query 126589 TACGTATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGT 126647
||||||||||| |||||||||| |||||| |||| | |||||| ||||||| || ||
Sbjct 393216 TACGTATACCACAAATTGGAGATAAATTTGCTTCTCGCCATGGCC-AAAAAGGTACGTGC 393158
Query 126648 GGTATGATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATT 126707
||||| ||| ||||||||||||||||||||| ||| | | || ||||||
Sbjct 393157 GGTATACAATATCGGCAAGAAGATATGCCGTTTACATGCGAAGGCCTAGCACCTGATATT 393098
Query 126708 ATAATTAATCC 126718
|| ||||| ||
Sbjct 393097 ATTATTAACCC 393087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658196280334320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |