Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value SEQ19160 89.7 7e-13 SEQ18560 89.7 7e-13 >SEQ19160 Length=94237 Score = 89.7 bits (98), Expect = 7e-13 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 126601 AAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTATGATTTAT 126659 ||||||| ||||| ||| |||| | |||||| ||||||||||||| ||||| ||| Sbjct 70090 AAATTGGCGACAAGTTTGCTTCTCGTCATGGCC-AAAAAGGAACTTGCGGTATTCAATAT 70032 Query 126660 GCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTATAATTAATCCA 126719 || ||||||||||| |||||| | || || |||||||||||||| || ||||| Sbjct 70031 CGGCACGAAGATATGCCTTTTACAAAGGACGGGATTACCCCCGATATTATCATAAATCCT 69972 Query 126720 AATTGTATACCGTCAAGAATGACCAT 126745 || ||| || || | ||||| || Sbjct 69971 CATGCTATTCCATCTCGTATGACAAT 69946 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 126952 TAGGTCCAACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAA 127011 |||||||||| |||||||| || |||||||||||||| |||| ||||| ||||| | Sbjct 69644 TAGGTCCAACGTACTATCAGCGACTTAAACATATGGTGGAAGACAAAATTCATGCACGTT 69585 Query 127012 GTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTG 127071 || || | || || ||| ||| ||||||| |||| | | | ||||||| Sbjct 69584 CTCGCGGACCCGTGCAAATTTTAGTTCGGCAACCAATGGATGGTAGAGCACGCGGTGGTG 69525 Query 127072 GATTAAGATTTGGAGAAATGGAAAAAGATTG 127102 | ||| | ||||| ||||||||| ||||| Sbjct 69524 GTTTACGTTTTGGTGAAATGGAACGTGATTG 69494 >SEQ18560 Length=475018 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 126589 TACGTATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGT 126647 ||||||||||| |||||||||| |||||| |||| | |||||| ||||||| || || Sbjct 393216 TACGTATACCACAAATTGGAGATAAATTTGCTTCTCGCCATGGCC-AAAAAGGTACGTGC 393158 Query 126648 GGTATGATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATT 126707 ||||| ||| ||||||||||||||||||||| ||| | | || |||||| Sbjct 393157 GGTATACAATATCGGCAAGAAGATATGCCGTTTACATGCGAAGGCCTAGCACCTGATATT 393098 Query 126708 ATAATTAATCC 126718 || ||||| || Sbjct 393097 ATTATTAACCC 393087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658196280334320