Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value SEQ17304 93.3 1e-14 >SEQ17304 Length=5410 Score = 93.3 bits (102), Expect = 1e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 38178 GCTGATGCTGAAGGAAAGCGAATTCTTGAGGTTTTGGCTGTCGTGGAAATGCCAGGTAAT 38237 || ||||||||||| ||| | ||||||||||||| || || |||||||||||| | || Sbjct 3328 GCAGATGCTGAAGGTAAGAGGGTTCTTGAGGTTTTAGCCGTGGTGGAAATGCCACGGAAA 3387 Query 38238 TGGCAGAGAAGAATTATTTACGCCTGTCATC-TCATAGAACCTGAAGGTAAGGAGAGGAA 38296 | || |||||||||| || || || | | || || ||||| |||| ||||| Sbjct 3388 TTTCAACGAAGAATTATCTATCAATG-CACCATGATCCCCCCAGAAGGAAAGGCAAGGAA 3446 Query 38297 AGGCAGAAAGGCTTACACAGTAACTGAATCCAGATTCTTAAAAATGGCTTCTGGTTATTT 38356 | | | | || | || ||||| || ||||| ||||||||| || |||||||| Sbjct 3447 AATCTCAGTGACTCATTGCGTTACTGAGTCAAGATTTAAAAAAATGGCATCAGGTTATTT 3506 Query 38357 TGCAGATTACGAA 38369 | ||||||||| Sbjct 3507 CACTGATTACGAA 3519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158474271592952