Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23413 147 3e-30
SEQ14824 141 1e-28
SEQ11801 129 7e-25
>SEQ23413
Length=15718
Score = 147 bits (162), Expect = 3e-30
Identities = 476/746 (64%), Gaps = 60/746 (8%)
Strand=Plus/Plus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| || |||||||| || |||| | |||| |||| | || ||||||| || || ||
Sbjct 624 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 683
Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129
| | || | || || |||||| ||| | ||||||||| | | || | ||
Sbjct 684 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 743
Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189
|||| || | || ||| | | |||| || ||||| | |||||||| |||||
Sbjct 744 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 803
Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249
|||||| || ||||| | | || |||||||||||||| ||||| || |||| | ||
Sbjct 804 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 863
Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309
| || || | ||| || || || |||||| |||| || || ||||||||||| ||
Sbjct 864 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 923
Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369
||||| || | | |||| ||| || ||| ||| | | ||||||||| | ||
Sbjct 924 AGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGTGC 983
Query 37370 CCAATCTGCCTTTAATTTAAC-----ACAT----TCAATTG--TT--TCAATTGCT---T 37413
||| || ||||| || || ||| ||||| | || ||| |||| |
Sbjct 984 CCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCTCT 1043
Query 37414 TTAAGAGAAAGtttttttC----------------------------------------T 37433
| || | ||| ||| |||| |
Sbjct 1044 TAAAAAAAAATTTTATTTCACAATACATACAATACACTCCATAAATAAACATACCTTTCT 1103
Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493
||| ||| | | |||||| ||||| | | ||||||||||| || || | |||||||
Sbjct 1104 TCATGATCCTTAACATAAGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCA 1163
Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553
|| ||||| ||||| || || || || |||||||||| | |||||| || | ||
Sbjct 1164 ATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAG 1223
Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATAT 37613
| || |||| || || ||||| || |||||| ||| ||||||||||| | | ||
Sbjct 1224 CGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGC 1283
Query 37614 TTTATAAAATGTCTTTCATCATTTGAT--AATTTTTTCCAATCATTAATATCTTTTGATA 37671
|| ||||||| | || | | | || ||||| | |||||||| | ||| || | |
Sbjct 1284 TTAATAAAATAACGCTCGT--TGTCATTCAATTTCTCCCAATCATCCAAATCCTTAGCAA 1341
Query 37672 AATCAACTTCATCAACGGTCCAAAAA 37697
||||| || || || |||||||
Sbjct 1342 GGTCAACCTCTTCCACAACCCAAAAA 1367
>SEQ14824
Length=19491
Score = 141 bits (156), Expect = 1e-28
Identities = 475/747 (64%), Gaps = 62/747 (8%)
Strand=Plus/Plus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| || |||||||| || |||| | |||| |||| | || ||||||| || || ||
Sbjct 4960 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 5019
Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129
| | || | || || |||||| ||| | ||||||||| | | || | ||
Sbjct 5020 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 5079
Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189
|||| || | || ||| | | |||| || ||||| | |||||||| |||||
Sbjct 5080 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 5139
Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249
|||||| || ||||| | | || |||||||||||||| ||||| || |||| | ||
Sbjct 5140 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 5199
Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309
| || || | ||| || || || |||||| |||| || || ||||||||||| ||
Sbjct 5200 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 5259
Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369
||||| || | | |||| ||| || ||| ||| | | ||||||||| | ||
Sbjct 5260 AGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGTGC 5319
Query 37370 CCAATCTGCCTTTAATTTAAC-----ACAT----TCAATTG--TT--TCAATTGCT---T 37413
||| || ||||| || || ||| ||||| | || ||| |||| |
Sbjct 5320 CCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCTCT 5379
Query 37414 TTAAGAGAAAGtttttttC----------------------------------------T 37433
| || | ||| ||| |||| |
Sbjct 5380 TAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTTTCT 5439
Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493
||| ||| | | ||| || ||||| | | ||||||||||| || || | |||||||
Sbjct 5440 TCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCA 5499
Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553
|| ||||| ||||| || || || || |||||||||| | |||||| || | ||
Sbjct 5500 ATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAG 5559
Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATAT 37613
| || |||| || || ||||| || |||||| ||| ||||||||||| | | ||
Sbjct 5560 CGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGC 5619
Query 37614 TTTATAAAATGTCTTTC---ATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGAT 37670
|| ||||| | | || ||||| |||||| | |||||||| | ||| || |
Sbjct 5620 TTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTAGCA 5676
Query 37671 AAATCAACTTCATCAACGGTCCAAAAA 37697
| ||||| || || || |||||||
Sbjct 5677 AGGTCAACCTCTTCCACAACCCAAAAA 5703
Score = 141 bits (156), Expect = 1e-28
Identities = 475/747 (64%), Gaps = 62/747 (8%)
Strand=Plus/Plus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| || |||||||| || |||| | |||| |||| | || ||||||| || || ||
Sbjct 11759 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 11818
Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129
| | || | || || |||||| ||| | ||||||||| | | || | ||
Sbjct 11819 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 11878
Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189
|||| || | || ||| | | |||| || ||||| | |||||||| |||||
Sbjct 11879 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 11938
Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249
|||||| || ||||| | | || |||||||||||||| ||||| || |||| | ||
Sbjct 11939 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 11998
Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309
| || || | ||| || || || |||||| |||| || || ||||||||||| ||
Sbjct 11999 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 12058
Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369
||||| || | | |||| ||| || ||| ||| | | ||||||||| | ||
Sbjct 12059 AGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGTGC 12118
Query 37370 CCAATCTGCCTTTAATTTAAC-----ACAT----TCAATTG--TT--TCAATTGCT---T 37413
||| || ||||| || || ||| ||||| | || ||| |||| |
Sbjct 12119 CCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCTCT 12178
Query 37414 TTAAGAGAAAGtttttttC----------------------------------------T 37433
| || | ||| ||| |||| |
Sbjct 12179 TAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTTTCT 12238
Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493
||| ||| | | ||| || ||||| | | ||||||||||| || || | |||||||
Sbjct 12239 TCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCA 12298
Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553
|| ||||| ||||| || || || || |||||||||| | |||||| || | ||
Sbjct 12299 ATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAG 12358
Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATAT 37613
| || |||| || || ||||| || |||||| ||| ||||||||||| | | ||
Sbjct 12359 CGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGC 12418
Query 37614 TTTATAAAATGTCTTTC---ATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGAT 37670
|| ||||| | | || ||||| |||||| | |||||||| | ||| || |
Sbjct 12419 TTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTAGCA 12475
Query 37671 AAATCAACTTCATCAACGGTCCAAAAA 37697
| ||||| || || || |||||||
Sbjct 12476 AGGTCAACCTCTTCCACAACCCAAAAA 12502
>SEQ11801
Length=23874
Score = 129 bits (142), Expect = 7e-25
Identities = 254/373 (68%), Gaps = 2/373 (1%)
Strand=Plus/Minus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| |||||||||||||| |||| |||| |||| | || ||||||| || || ||
Sbjct 20477 ATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAGGAGATTAAC 20418
Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129
| | || | || || |||||| ||| | ||||||||| | | || | ||
Sbjct 20417 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 20358
Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189
|||| || | || ||| | | || | || ||||| | |||||||| |||||
Sbjct 20357 AATACGTTGCTTAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATGCAAAGTCACA 20298
Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249
|||||| || ||||| | | || |||||||||||||| ||||| || ||| | ||
Sbjct 20297 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCATGCAAGATGCC 20238
Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309
| || || | ||| || || || |||||| |||| || || ||||||||||| ||
Sbjct 20237 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACCGC 20178
Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTT-GAACTATAATCAGAAATCCAtttttttG 37368
||||| || | | |||| ||| |||||| | ||| | | ||||||||| | ||
Sbjct 20177 AGCAAAAGCAATGATACGTTCACC-AAAGTTCGCACTTTTAGAAGAAATCCAAGCTAGTG 20119
Query 37369 TCCAATCTGCCTT 37381
||| || |||||
Sbjct 20118 CCCATTCAGCCTT 20106
Score = 96.9 bits (106), Expect = 4e-15
Identities = 130/180 (72%), Gaps = 1/180 (1%)
Strand=Plus/Minus
Query 37429 tttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATAT 37488
|||| ||| ||| | ||||| || ||||| | | ||||||||||| || || | |
Sbjct 20003 TTTCGTCATAATCCTTAATATAGGTGTCAATCAAGATGCTATACATTTCGGAATGGACGT 19944
Query 37489 TTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAA 37548
| || ||||| || ||||| || || || || |||||||||| | |||||| || ||
Sbjct 19943 TCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCAGCAACTTGAACTTCTTTGC 19884
Query 37549 AAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGC-AAGA 37607
|| | || |||| || || ||||| || |||||| ||| ||||||||||| ||||
Sbjct 19883 TGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGA 19824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592130649637680
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