Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value SEQ23413 147 3e-30 SEQ14824 141 1e-28 SEQ11801 129 7e-25 >SEQ23413 Length=15718 Score = 147 bits (162), Expect = 3e-30 Identities = 476/746 (64%), Gaps = 60/746 (8%) Strand=Plus/Plus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||| || |||| | |||| |||| | || ||||||| || || || Sbjct 624 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 683 Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129 | | || | || || |||||| ||| | ||||||||| | | || | || Sbjct 684 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 743 Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189 |||| || | || ||| | | |||| || ||||| | |||||||| ||||| Sbjct 744 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 803 Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249 |||||| || ||||| | | || |||||||||||||| ||||| || |||| | || Sbjct 804 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 863 Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309 | || || | ||| || || || |||||| |||| || || ||||||||||| || Sbjct 864 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 923 Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369 ||||| || | | |||| ||| || ||| ||| | | ||||||||| | || Sbjct 924 AGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGTGC 983 Query 37370 CCAATCTGCCTTTAATTTAAC-----ACAT----TCAATTG--TT--TCAATTGCT---T 37413 ||| || ||||| || || ||| ||||| | || ||| |||| | Sbjct 984 CCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCTCT 1043 Query 37414 TTAAGAGAAAGtttttttC----------------------------------------T 37433 | || | ||| ||| |||| | Sbjct 1044 TAAAAAAAAATTTTATTTCACAATACATACAATACACTCCATAAATAAACATACCTTTCT 1103 Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493 ||| ||| | | |||||| ||||| | | ||||||||||| || || | ||||||| Sbjct 1104 TCATGATCCTTAACATAAGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCA 1163 Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553 || ||||| ||||| || || || || |||||||||| | |||||| || | || Sbjct 1164 ATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAG 1223 Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATAT 37613 | || |||| || || ||||| || |||||| ||| ||||||||||| | | || Sbjct 1224 CGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGC 1283 Query 37614 TTTATAAAATGTCTTTCATCATTTGAT--AATTTTTTCCAATCATTAATATCTTTTGATA 37671 || ||||||| | || | | | || ||||| | |||||||| | ||| || | | Sbjct 1284 TTAATAAAATAACGCTCGT--TGTCATTCAATTTCTCCCAATCATCCAAATCCTTAGCAA 1341 Query 37672 AATCAACTTCATCAACGGTCCAAAAA 37697 ||||| || || || ||||||| Sbjct 1342 GGTCAACCTCTTCCACAACCCAAAAA 1367 >SEQ14824 Length=19491 Score = 141 bits (156), Expect = 1e-28 Identities = 475/747 (64%), Gaps = 62/747 (8%) Strand=Plus/Plus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||| || |||| | |||| |||| | || ||||||| || || || Sbjct 4960 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 5019 Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129 | | || | || || |||||| ||| | ||||||||| | | || | || Sbjct 5020 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 5079 Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189 |||| || | || ||| | | |||| || ||||| | |||||||| ||||| Sbjct 5080 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 5139 Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249 |||||| || ||||| | | || |||||||||||||| ||||| || |||| | || Sbjct 5140 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 5199 Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309 | || || | ||| || || || |||||| |||| || || ||||||||||| || Sbjct 5200 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 5259 Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369 ||||| || | | |||| ||| || ||| ||| | | ||||||||| | || Sbjct 5260 AGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGTGC 5319 Query 37370 CCAATCTGCCTTTAATTTAAC-----ACAT----TCAATTG--TT--TCAATTGCT---T 37413 ||| || ||||| || || ||| ||||| | || ||| |||| | Sbjct 5320 CCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCTCT 5379 Query 37414 TTAAGAGAAAGtttttttC----------------------------------------T 37433 | || | ||| ||| |||| | Sbjct 5380 TAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTTTCT 5439 Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493 ||| ||| | | ||| || ||||| | | ||||||||||| || || | ||||||| Sbjct 5440 TCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCA 5499 Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553 || ||||| ||||| || || || || |||||||||| | |||||| || | || Sbjct 5500 ATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAG 5559 Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATAT 37613 | || |||| || || ||||| || |||||| ||| ||||||||||| | | || Sbjct 5560 CGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGC 5619 Query 37614 TTTATAAAATGTCTTTC---ATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGAT 37670 || ||||| | | || ||||| |||||| | |||||||| | ||| || | Sbjct 5620 TTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTAGCA 5676 Query 37671 AAATCAACTTCATCAACGGTCCAAAAA 37697 | ||||| || || || ||||||| Sbjct 5677 AGGTCAACCTCTTCCACAACCCAAAAA 5703 Score = 141 bits (156), Expect = 1e-28 Identities = 475/747 (64%), Gaps = 62/747 (8%) Strand=Plus/Plus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||| || |||| | |||| |||| | || ||||||| || || || Sbjct 11759 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 11818 Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129 | | || | || || |||||| ||| | ||||||||| | | || | || Sbjct 11819 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 11878 Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189 |||| || | || ||| | | |||| || ||||| | |||||||| ||||| Sbjct 11879 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 11938 Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249 |||||| || ||||| | | || |||||||||||||| ||||| || |||| | || Sbjct 11939 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 11998 Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309 | || || | ||| || || || |||||| |||| || || ||||||||||| || Sbjct 11999 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 12058 Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369 ||||| || | | |||| ||| || ||| ||| | | ||||||||| | || Sbjct 12059 AGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGTGC 12118 Query 37370 CCAATCTGCCTTTAATTTAAC-----ACAT----TCAATTG--TT--TCAATTGCT---T 37413 ||| || ||||| || || ||| ||||| | || ||| |||| | Sbjct 12119 CCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCTCT 12178 Query 37414 TTAAGAGAAAGtttttttC----------------------------------------T 37433 | || | ||| ||| |||| | Sbjct 12179 TAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTTTCT 12238 Query 37434 TCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493 ||| ||| | | ||| || ||||| | | ||||||||||| || || | ||||||| Sbjct 12239 TCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCA 12298 Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553 || ||||| ||||| || || || || |||||||||| | |||||| || | || Sbjct 12299 ATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAG 12358 Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATAT 37613 | || |||| || || ||||| || |||||| ||| ||||||||||| | | || Sbjct 12359 CGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGC 12418 Query 37614 TTTATAAAATGTCTTTC---ATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGAT 37670 || ||||| | | || ||||| |||||| | |||||||| | ||| || | Sbjct 12419 TTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTAGCA 12475 Query 37671 AAATCAACTTCATCAACGGTCCAAAAA 37697 | ||||| || || || ||||||| Sbjct 12476 AGGTCAACCTCTTCCACAACCCAAAAA 12502 >SEQ11801 Length=23874 Score = 129 bits (142), Expect = 7e-25 Identities = 254/373 (68%), Gaps = 2/373 (1%) Strand=Plus/Minus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| |||||||||||||| |||| |||| |||| | || ||||||| || || || Sbjct 20477 ATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAGGAGATTAAC 20418 Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129 | | || | || || |||||| ||| | ||||||||| | | || | || Sbjct 20417 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 20358 Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189 |||| || | || ||| | | || | || ||||| | |||||||| ||||| Sbjct 20357 AATACGTTGCTTAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATGCAAAGTCACA 20298 Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249 |||||| || ||||| | | || |||||||||||||| ||||| || ||| | || Sbjct 20297 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCATGCAAGATGCC 20238 Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309 | || || | ||| || || || |||||| |||| || || ||||||||||| || Sbjct 20237 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACCGC 20178 Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTT-GAACTATAATCAGAAATCCAtttttttG 37368 ||||| || | | |||| ||| |||||| | ||| | | ||||||||| | || Sbjct 20177 AGCAAAAGCAATGATACGTTCACC-AAAGTTCGCACTTTTAGAAGAAATCCAAGCTAGTG 20119 Query 37369 TCCAATCTGCCTT 37381 ||| || ||||| Sbjct 20118 CCCATTCAGCCTT 20106 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/180 (72%), Gaps = 1/180 (1%) Strand=Plus/Minus Query 37429 tttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATAT 37488 |||| ||| ||| | ||||| || ||||| | | ||||||||||| || || | | Sbjct 20003 TTTCGTCATAATCCTTAATATAGGTGTCAATCAAGATGCTATACATTTCGGAATGGACGT 19944 Query 37489 TTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAA 37548 | || ||||| || ||||| || || || || |||||||||| | |||||| || || Sbjct 19943 TCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCAGCAACTTGAACTTCTTTGC 19884 Query 37549 AAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGC-AAGA 37607 || | || |||| || || ||||| || |||||| ||| ||||||||||| |||| Sbjct 19883 TGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGA 19824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592130649637680