Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value SEQ23413 105 1e-17 SEQ14824 102 2e-16 SEQ11801 102 2e-16 >SEQ23413 Length=15718 Score = 105 bits (116), Expect = 1e-17 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || |||||||| || || || || || || ||||||||| || || ||| Sbjct 1140 TACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCA 1199 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || |||||| | ||| | ||||| | |||||| || || || ||||| ||| Sbjct 1200 GTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 1259 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590 ||||||||||| || | || ||| |||| |||| |||||||||| Sbjct 1260 GCAGCAAAGAAAGCTAAGATATGCTTAATAAAATAACGCTCGTTGT 1305 >SEQ14824 Length=19491 Score = 102 bits (112), Expect = 2e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || |||||||| || || || || || || ||||||||| || || ||| Sbjct 5476 TACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCA 5535 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || |||||| | ||| | ||||| | |||||| || || || ||||| ||| Sbjct 5536 GTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 5595 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590 ||||||||||| || | || ||| |||| || | |||||||||| Sbjct 5596 GCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGCTCGTTGT 5641 Score = 102 bits (112), Expect = 2e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || |||||||| || || || || || || ||||||||| || || ||| Sbjct 12275 TACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCA 12334 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || |||||| | ||| | ||||| | |||||| || || || ||||| ||| Sbjct 12335 GTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 12394 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590 ||||||||||| || | || ||| |||| || | |||||||||| Sbjct 12395 GCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGCTCGTTGT 12440 >SEQ11801 Length=23874 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || || || ||||| ||||| || || || ||||||||| || || ||| Sbjct 19962 TACATTTCGGAATGGACGTTCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCA 19903 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || |||||| || ||| | ||||| | |||||| || || || ||||| ||| Sbjct 19902 GCAACTTGAACTTCTTTGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 19843 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTT 48588 ||||||||||| || | || ||| ||||| || |||||||| Sbjct 19842 GCAGCAAAGAAAGCTAAGATATGCTTAAGAAAGAAACGCTCGTT 19799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931240042529280