Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23413 105 1e-17
SEQ14824 102 2e-16
SEQ11801 102 2e-16
>SEQ23413
Length=15718
Score = 105 bits (116), Expect = 1e-17
Identities = 123/166 (74%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
||||| || || |||||||| || || || || || || ||||||||| || || |||
Sbjct 1140 TACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCA 1199
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
|| || |||||| | ||| | ||||| | |||||| || || || ||||| |||
Sbjct 1200 GTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 1259
Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590
||||||||||| || | || ||| |||| |||| ||||||||||
Sbjct 1260 GCAGCAAAGAAAGCTAAGATATGCTTAATAAAATAACGCTCGTTGT 1305
>SEQ14824
Length=19491
Score = 102 bits (112), Expect = 2e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
||||| || || |||||||| || || || || || || ||||||||| || || |||
Sbjct 5476 TACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCA 5535
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
|| || |||||| | ||| | ||||| | |||||| || || || ||||| |||
Sbjct 5536 GTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 5595
Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590
||||||||||| || | || ||| |||| || | ||||||||||
Sbjct 5596 GCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGCTCGTTGT 5641
Score = 102 bits (112), Expect = 2e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
||||| || || |||||||| || || || || || || ||||||||| || || |||
Sbjct 12275 TACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCA 12334
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
|| || |||||| | ||| | ||||| | |||||| || || || ||||| |||
Sbjct 12335 GTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 12394
Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590
||||||||||| || | || ||| |||| || | ||||||||||
Sbjct 12395 GCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGCTCGTTGT 12440
>SEQ11801
Length=23874
Score = 102 bits (112), Expect = 2e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
||||| || || || || ||||| ||||| || || || ||||||||| || || |||
Sbjct 19962 TACATTTCGGAATGGACGTTCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCA 19903
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
|| || |||||| || ||| | ||||| | |||||| || || || ||||| |||
Sbjct 19902 GCAACTTGAACTTCTTTGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAA 19843
Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTT 48588
||||||||||| || | || ||| ||||| || ||||||||
Sbjct 19842 GCAGCAAAGAAAGCTAAGATATGCTTAAGAAAGAAACGCTCGTT 19799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931240042529280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |