Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value SEQ19926 82.4 5e-11 >SEQ19926 Length=251428 Score = 82.4 bits (90), Expect = 5e-11 Identities = 175/255 (69%), Gaps = 11/255 (4%) Strand=Plus/Minus Query 78365 ATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTA-CTTCCAGTC 78423 ||||||||| || | ||| | ||||| || ||||| | || || ||| | | Sbjct 64298 ATGATTCTTATATACATGCGTATCACCCATAGTGTGTACAAAACAACCAGGCTTTAATCC 64239 Query 78424 CGCACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTC 78483 || | | ||||||||| ||||| |||||||| || || || ||||| |||||||||| | Sbjct 64238 CGTA-ACATGCGCAATCATATGCGTAAGTAAAGCATAAGAGGCAATATTAAATGGAACAC 64180 Query 78484 CTAAGA---ATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTG 78540 | |||| ||| ||| | || || || || | ||| ||| || || |||| | Sbjct 64179 C-AAGACCCATA--TCAGCACTGCGCTGATATAGTTGACAAGATAACT---CATCGTTAG 64126 Query 78541 ATACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAG 78600 |||| ||||||| || | || || || ||||||||||| | | || ||| | Sbjct 64125 CTACGAAAAACTGAGCTAAACAATGGCATGGTGGTAGTGCCATTTTAGGTATATCACATG 64066 Query 78601 GATTCCAAGCAGACA 78615 ||||||| ||||||| Sbjct 64065 GATTCCATGCAGACA 64051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300068025535600