Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq2607 111 1e-19
seq5553 107 2e-18
SEQ18352 104 2e-17
>seq2607
Length=223464
Score = 111 bits (122), Expect = 1e-19
Identities = 160/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 28544 TTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAAC 28603
||| || |||||||| ||||| || || || ||||||| || ||||| ||| ||
Sbjct 125041 TTGCGTCAAAATGCAGATATTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGT 124982
Query 28604 GGAACCTTCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGC 28662
|||||| || || || | | || |||| || || | || |||||||||||| | |
Sbjct 124981 GGAACCATCGGACACTATCGAAAATGTCAAAGCCAAGATTCAG-GACAAAGAGGGAATTC 124923
Query 28663 CCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGG 28722
| |||||| || | | || ||||| || ||||||||||||||| | || ||
Sbjct 124922 CTCCAGATCAGCAACGTTTGATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGT 124863
Query 28723 CCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
|||||||||| |||||||| ||||| || || ||| |||| ||
Sbjct 124862 CCGATTATAATATTCAAAAGGAATCAACACTTCACTTGGTGTT 124820
>seq5553
Length=18996
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 28544 TTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAAC 28603
||| || |||||||| ||||| || || || ||||||| || ||||| ||| ||
Sbjct 18349 TTGCGTCAAAATGCAGATATTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGT 18408
Query 28604 GGAACCTTCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGC 28662
||||| || || || | | || |||| || || | || |||||||||||| | |
Sbjct 18409 TGAACCATCGGACACTATCGAAAATGTCAAAGCCAAGATTCAG-GACAAAGAGGGAATTC 18467
Query 28663 CCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGG 28722
| |||||| || | | || ||||| || ||||||||||||||| | || ||
Sbjct 18468 CTCCAGATCAGCAACGTTTGATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGT 18527
Query 28723 CCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
|||||||||| |||||||| ||||| || || ||| |||| ||
Sbjct 18528 CCGATTATAATATTCAAAAGGAATCAACACTTCACTTGGTGTT 18570
>SEQ18352
Length=541547
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || || || || || || ||||||||||| || || || ||
Sbjct 390753 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAGCCATCT 390812
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| |||||| || ||||| || | ||| |||||||
Sbjct 390813 GACACCATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 390872
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | | |||||||| ||||||||| | |||||| | ||| || |||| || |||
Sbjct 390873 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTTTGTCCGACTACAAC 390932
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||| | || ||||||| | ||||| || || ||
Sbjct 390933 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTTTACGTGGTGGTAT 390982
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| || || || || |||||||| || |||||||| || || ||||||
Sbjct 399235 AAAATGCAGATCTTCGTGAAGACATTAACAGGCAAAACCATCACTTTGGAGGTGGAACCA 399294
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || | | | || | ||| |||||| |||||||| || | || ||||
Sbjct 399295 TCTGATAGCATCGAAAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCACCAGAT 399354
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| | | || ||||| || || ||| | |||||| | || | | ||||||
Sbjct 399355 CAACAACGCTTAATATTTGCTGGTAAGCAACTTGAAGATGGTCGCACCCTTTCTGATTAT 399414
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||||||||| ||| | ||| |||| | | |||||||| |||||
Sbjct 399415 AACATACAAAAAGAATCCACTTTACACTTGGTCCTTCGTTTACGAGGTGGGAT 399467
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || || || || || ||||| || ||||| || ||| || ||||| ||
Sbjct 400834 ATGCAGATTTTCGTTAAGACTTTAACAGGCAAAACGATCACCTTAGAGGTCGAACCATCT 400893
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| | | | | | ||| ||||| ||||||||||| | || |||||||
Sbjct 400894 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400953
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || ||||| || ||||||||||||||| ||| | ||||||||||
Sbjct 400954 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTCTCCGATTATAAT 401013
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||| ||||||||| |||| |||||||| | |||| || || ||
Sbjct 401014 ATTCAAAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGGTAT 401063
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| |||||||| ||||| | || || || |||||||| ||| ||||| ||
Sbjct 401062 ATGCAGATATTTGTTAAAACCCTGACCGGCAAGACCATTACACTAGAAGTCGAACCATCT 401121
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| | | | | ||||| ||||| ||||||||||| | || ||| |||
Sbjct 401122 GATAGTATTGAGAACGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGACCAA 401181
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || ||||| || ||||||||||||||| | || | ||||||| ||
Sbjct 401182 CAACGTTTGATATTTGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCCGATTACAAT 401241
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| || ||||||||| |||| |||||||| | |||| || || ||
Sbjct 401242 ATTCAGAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGGTAT 401291
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || || ||||| || || || || ||||||||||| || ||||| ||
Sbjct 389841 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATTACTTTGGAGGTTGAACCATCT 389900
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| |||||| |||||||| || | || ||||||
Sbjct 389901 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCACCAGATCAG 389960
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | | || || || ||||| || | |||||| | ||| || |||| || |||
Sbjct 389961 CAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCCGACTACAAC 390020
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| || |||||||||||||| ||| |||| || | |||| || || ||
Sbjct 390021 ATCCAGAAAGAATCTACTCTCCACTTGGTCTTGCGTCTACGTGGTGGTAT 390070
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| |||||||| ||||| || || || ||||| ||||| ||| ||| | ||
Sbjct 400150 ATGCAGATATTTGTTAAAACCTTGACTGGCAAAACTATTACATTGGAAGTCGAAGCATCT 400209
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| ||| | | | ||||| || || || |||||||| | || ||| |||
Sbjct 400210 GACACGATTGAGAACGTCAAGGCCAAGATTCAAGATAAAGAGGGCATTCCTCCAGACCAA 400269
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || || || || ||||||||||||||| || | | ||||| ||
Sbjct 400270 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTCTCTGATTACAAT 400329
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||| ||||||||| |||| |||||||| | |||| || || ||
Sbjct 400330 ATTCAAAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGGTAT 400379
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| |||||||||||||| || || || ||||||||||| ||| ||| | ||
Sbjct 401974 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACCATTACATTGGAAGTCGAAGCATCT 402033
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| ||| | | | ||||| ||||| || ||||| || | || ||| |||
Sbjct 402034 GACACGATTGAGAACGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCTCCAGACCAA 402093
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || || || || ||||||||||||||| | || | | || || |||
Sbjct 402094 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCTGACTACAAC 402153
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| || |||||||| || || || |||||||| | |||| || || ||
Sbjct 402154 ATACAGAAAGAATCCACACTTCATTTGGTATTACGCCTACGTGGCGGTAT 402203
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| ||||| ||||| || || |||||||||||||| ||| || ||
Sbjct 388926 AACATGCAAATCTTTGTGAAAACTTTGACTGGTAAAACCATTACTTTGGAAGTCGAGCCA 388985
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | || ||||| ||||| || || || || | || |||
Sbjct 388986 TCCGACACCATTGAAAATGTCAAGGCTAAAATTCAGGATAAGGAAGGTATTCCACCAGAC 389045
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| | | || ||||| || || |||||||| ||| || | |||| ||
Sbjct 389046 CAACAACGTTTAATTTTTGCTGGTAAGCAATTGGAGGATGGGCGTACCCTCTCCGACTAC 389105
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||| ||||| ||||| ||| |||| || | |||| || || ||
Sbjct 389106 AACATTCAAAAGGAATCAACTCTCCACTTGGTCTTGCGTCTACGTGGTGGTAT 389158
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || || || || || ||||||||||| ||| ||||| ||
Sbjct 390297 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAAACCATTACATTGGAAGTTGAACCATCT 390356
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || ||||| ||||| ||||||||||| | ||| ||||||
Sbjct 390357 GATACTATTGAAAATGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCCCCAGATCAG 390416
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | | || || || || || || ||||||||| | || | | || || |||
Sbjct 390417 CAGCGTTTGATTTTCGCTGGTAAGCAGTTGGAAGATGGTCGTACCTTATCTGACTACAAC 390476
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| || || ||||| || || || |||||||| | |||| || || ||
Sbjct 390477 ATACAGAAGGAATCCACACTTCATTTGGTATTACGTCTACGTGGTGGTAT 390526
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || |||||||| || || || || ||||| || ||| || ||||| ||
Sbjct 399922 ATGCAGATTTTTGTAAAGACTTTGACAGGCAAAACTATCACCTTAGAGGTCGAACCATCT 399981
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| | | | | | ||| ||||| ||||||||||| | || |||||||
Sbjct 399982 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400041
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || ||||| || ||||||||||||||| ||| | ||||||| |||
Sbjct 400042 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 400101
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766
||||| || ||||| || || || ||||||||
Sbjct 400102 ATTCAGAAGGAATCCACACTTCATTTGGTATTA 400134
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| |||||||| ||||| || || || ||||| ||||| ||| ||| | ||
Sbjct 400606 ATGCAGATATTTGTTAAAACCTTGACTGGCAAAACAATTACGTTGGAAGTCGAAGCATCT 400665
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | ||||| || || || |||||||| | || ||| |||
Sbjct 400666 GACACAATTGAGAACGTCAAGGCCAAGATTCAAGATAAAGAGGGCATTCCTCCAGACCAA 400725
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || || || || || |||||||||||| ||| | ||||||| ||
Sbjct 400726 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGATGGACGTACTCTCTCCGATTACAAT 400785
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| || ||||||||| |||| |||||||| | |||| || || ||
Sbjct 400786 ATTCAGAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGGTAT 400835
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| |||||||| ||||| || || || ||||| ||||| ||| ||| | ||
Sbjct 401518 ATGCAGATATTTGTTAAAACCTTGACTGGCAAAACAATTACATTGGAAGTCGAAGCATCT 401577
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | ||||| || || || |||||||| | || ||| |||
Sbjct 401578 GACACAATTGAGAACGTCAAGGCCAAGATTCAAGATAAAGAGGGCATTCCTCCAGACCAA 401637
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || || || || || |||||||||||| ||| | ||||||| ||
Sbjct 401638 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGATGGACGTACTCTCTCCGATTACAAT 401697
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| || ||||||||| |||| |||||||| | |||| || || ||
Sbjct 401698 ATTCAGAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGGTAT 401747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425274448258818
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