Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19298 185 4e-42
SEQ24359 178 7e-40
>SEQ19298
Length=518036
Score = 185 bits (204), Expect = 4e-42
Identities = 244/336 (73%), Gaps = 8/336 (2%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||||||||| |||||||| | ||||||||||||||||| || | ||||||| ||
Sbjct 235723 CATAAATAAATCAGGAATCCAAAGTGCATAAAATAAATCTCGAGCGCGGTTTTCTTCCTT 235782
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
||| |||||| || ||||||| || ||||| ||||| || ||||| ||||| | |||
Sbjct 235783 ACCGGTATTCTTCTTAAGATCTATAAATTCAAATATATCAGAATGCCAAGGTTCAAGATA 235842
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
|| |||||| || |||||| || |||||||| || || |||||||| | |||
Sbjct 235843 AATTGCAAAAGCTCCAGGTCTTTTACCACCACCTTGGTCAACATATCTTGCCACATTATT 235902
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTG----TGCTATGAATCT 26168
|| || | |||||||| ||||||||| |||||| || |||| || ||| || |
Sbjct 235903 AAATACCCTTAACATTGGCACTAATCCATTTGAAACACCATTTGTTCCTGATAT-AAACG 235961
Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228
|| ||| | | |||||| ||| ||| | || || ||||| || ||||||| |
Sbjct 235962 TG---CCTTTAGCTCTAATGCAATGAACATTTAATCCAATGCCACCGGCTGATTTTGATA 236018
Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264
| ||||| | | ||||| | |||||||||||
Sbjct 236019 TCATAGCACATTGTTCAACTGACTTGAAAATTCCTT 236054
Score = 147 bits (162), Expect = 1e-30
Identities = 336/500 (67%), Gaps = 8/500 (2%)
Strand=Plus/Plus
Query 24684 CTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAA 24743
|||||||||| ||||| |||||||||||||||||||| ||| ||||| ||| ||
Sbjct 234507 CTGCTGGTTTTGTTCTTAGATAATACATTCCAGTTTTTAATCCAGCTTTCCATGCGTGAA 234566
Query 24744 AATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAG 24803
|||| ||||| || | |||| || |||| | | | | || | ||||||
Sbjct 234567 AATGTATTGAAGTCAATTTTCCATAATTTGGCTCCGCCACATGAATATTAAATGATTGAC 234626
Query 24804 CTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATAT 24863
|| || |||| | |||||| ||||| | ||| | | || | || || |
Sbjct 234627 TCTGATCAATAAAAGCTCCTCTATCAGCAGCCATTCTAATAGTAGACTTAACAGAGATTT 234686
Query 24864 CGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTG 24923
| | | |||| ||| || || | |||| || | | |||||||||||| ||
Sbjct 234687 CCCACACATTTTTATATAAATCACGTAAATACTTTGGTATTCCTTCAATATTTTGAATTG 234746
Query 24924 ATCCATTTTCTCTCAATAGATTCAATCT--CATAT--TCGGTGTCCAAAGATTAATTTTT 24979
| || | | || ||| |||| ||| | ||| | ||| | ||| || | | ||
Sbjct 234747 AACCCCTAT-TCAAAAT-GATTAAATTTTTCATCTCATCGCT--CCACAGTTCTAGTTCA 234802
Query 24980 TCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTT 25039
||||||||| | ||| || | ||| | | |||||| ||||| || || ||||||
Sbjct 234803 GTAAGATCTCTTAACAAATGATGATTAACAACTTGAAATTCCCCAGATAACACCCTTCTT 234862
Query 25040 ATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTA 25099
| ||| || || || ||||||||||| |||||||||||||||| ||||||| ||
Sbjct 234863 GTATATATATTGGATGTATATGGTTCAAAAGATTCATTATTTCCTAATATTTGAGCTGTT 234922
Query 25100 GATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCT 25159
|||||||| |||||| || || | || |||||||| | |||||||| |||| | |
Sbjct 234923 GATGCTGTAGGCATTGGAGCAATAAGAAGAGAATTTCTAACACCATATTGTGCAATTTTT 234982
Query 25160 TGTTTTAATTTATCCCAATC 25179
|||||||| |||||||
Sbjct 234983 CCTTTTAATTCTGCCCAATC 235002
>SEQ24359
Length=906208
Score = 178 bits (196), Expect = 7e-40
Identities = 204/272 (75%), Gaps = 2/272 (1%)
Strand=Plus/Plus
Query 25887 TATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946
|||| ||||| | || | ||||| |||| ||||| | |||||||||||| |
Sbjct 359178 TATTAGGACACATTAGAGACCAATTTTCATTAGCTTCAACACGTTTCATAAATAAATCAG 359237
Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTT 26005
||||||| | ||||||||||||||||| |||| |||||||||| || ||| || |||
Sbjct 359238 GAATCCAGAGTGCATAAAATAAATCTCGAGCTCGGTTTTCTTCTTTACCAGTG-TTTTTT 359296
Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTA 26065
|| |||||||| || ||||| ||||| | ||||| ||||||| || || ||||||
Sbjct 359297 TTAAGATCTAAAAAGTCAAATATATCGGGATGCCAAGGTTCTAGGTAAATGGCAAAAGCT 359356
Query 26066 CCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAAC 26125
|| ||||| || || ||||| || || |||||||| | || |||||||| |||
Sbjct 359357 CCAGGCCTTTTACCACCGCCTTGGTCAACATATCTTGCCACATTGTTAAAAACTTTTAAC 359416
Query 26126 ATTGGAACTAATCCAGTTGAAAATCCGTTTGT 26157
||||| ||||||||| |||||| || |||||
Sbjct 359417 ATTGGTACTAATCCATTTGAAACACCATTTGT 359448
Score = 134 bits (148), Expect = 7e-27
Identities = 326/489 (67%), Gaps = 6/489 (1%)
Strand=Plus/Plus
Query 24684 CTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAA 24743
|||||||||| ||||| ||||| |||||||||||||| ||| ||||| ||||||
Sbjct 358008 CTGCTGGTTTTGTTCTTAGATAGTACATTCCAGTTTTTAATCCAGCTTTCCATGCGTAAA 358067
Query 24744 AATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAG 24803
|||| ||||| |||| ||||||| |||| | | | | | | || | || |||
Sbjct 358068 AATGTATTGAAGTTAATTTTGCATAATTTGGCTCTGCCACATAAATATTGAATGACTGAC 358127
Query 24804 CTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATAT 24863
||| || |||| || ||||| || | || || | || | | || |
Sbjct 358128 TTTGATCAATAAAAGCACCCCTGTCTGCTGCCATTCTTATAATAGCCTTAACAGGAATTT 358187
Query 24864 CGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTG 24923
| | | ||||| ||| || || |||| || | |||||||||||| |
Sbjct 358188 CCCATACAGTTTTATATACGTCACGTAAAAACTTTGGTATTTCTTCAATATTTTGAATCG 358247
Query 24924 ATCCATTTTCTCTCAATAG-ATTCAATCTCATA-TTCGGTGT-CCAAAGATTAATTTTTT 24980
|||| | ||||||| ||| ||| | || |||| || ||| || | | ||
Sbjct 358248 ATCCTCGAT---TCAATAGTATTGAATTTTTTAATTCGTCGTTCCATAGTTCCAGTTCAG 358304
Query 24981 CAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTA 25040
||||||| | | || || ||||| | | |||||| ||||| || |||||||||
Sbjct 358305 TAAGATCTTTTAATAAATGATTATTAACAACTTGAAATTCACCAGATAACACTCTTCTTG 358364
Query 25041 TTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAG 25100
| ||| || || || |||| |||||| |||||||||||||||| ||||||| || |
Sbjct 358365 TATATATATTCGATGTATATGGCTCAAAAGATTCATTATTTCCTAATATTTGAGCTGTTG 358424
Query 25101 ATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTT 25160
||||||| |||||| || || | || |||||||| | |||||||| |||| |
Sbjct 358425 ATGCTGTAGGCATTGGAGCGATAAGAAGAGAATTTCTAACACCATATTGTGCAATTTTGC 358484
Query 25161 GTTTTAATT 25169
||||||||
Sbjct 358485 TTTTTAATT 358493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252962463957650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |