Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19298 147 3e-30
SEQ24359 105 8e-18
seq8547 95.1 1e-14
>SEQ19298
Length=518036
Score = 147 bits (162), Expect = 3e-30
Identities = 595/918 (65%), Gaps = 37/918 (4%)
Strand=Plus/Minus
Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746
||||| | |||| | || |||||||| || | || ||||| || ||||| | ||
Sbjct 235763 GAGATTTATTTTATGCACTTTGGATTCCTGATTTATTTATGAAACGTGTTGAAGCTAATG 235704
Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT---GGGTG 75803
| ||||| ||| | || ||| |||| || || || | | ||| |||||
Sbjct 235703 AAAATTGGTCACTTATGTGCCCAAACAAATGTCCTGG---CTTGCATGAGGTTTGGGGTG 235647
Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT-GTA 75862
| || ||||||| | || ||||| |||||| |||| |||||||| ||| || | ||
Sbjct 235646 AAGAATTTGAAGATTTATATACAAAATATGAAAAGGAAGGTAGAGCAAATA-GAGTAGTT 235588
Query 75863 CCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922
||| | | ||||| ||||| | || |||| || |||||||| || |||
Sbjct 235587 AAAGCACAAGCTCTTTGGTTTGCTATAATTGAAGCACAAGTTGAAACTGGAACTCCTTAT 235528
Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982
||||| || |||||| | || || || ||||| ||| | ||||| ||||||||||||
Sbjct 235527 ATGCTATATAAGGATTCATGCAATCGCAAAAGTAATCAACAAAATTTAGGAACAATCAAG 235468
Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042
|| ||| | ||||| ||||| | |||||| | | ||||| | || ||||||
Sbjct 235467 TGCAGTAATTTATGCACAGAAATCGTTGAGTACTCTGCGCCAGATGAAATTGCAGTTTGC 235408
Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGA--AGAGACTCGCACTTTTGATT 76100
|| ||||| || || || || || ||||| ||| || || | |||| ||| |
Sbjct 235407 AACTTGGCTTCTATAGCACT----AAATATGTTTGTGACTAGTGA-TAAAACTTATGACT 235353
Query 76101 ATGAAAAACTTCATGAAATCA-CAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159
| | || ||| | | || | ||||| | || || | |||| |||| | | ||||||
Sbjct 235352 TTCAGAAGCTTAAATATATAAGCAAAG-TCGTAACTAGAAATTTAAATAAAATAATTGAC 235294
Query 76160 AGAAATTTTTATCCCGTTG--AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217
||| | ||| ||||||| || || |||||| || | | || |||||||| |
Sbjct 235293 GTAAACTATTA-CCCGTTGCCCGA-AGCAAAAAAGTCAAACTTAAGGCATAGACCTATCG 235236
Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAG 76277
|| | ||||| || || | || |||| | ||| | || || | | ||| |
Sbjct 235235 GTATTGGTGTGCAGGGATTTGCAGATGCTCTAATTGTACTGCGTTATCCTTATGAAAGTG 235176
Query 76278 ATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGG 76337
| ||||| ||||| | || |||||||| || ||| | | | |||| |
Sbjct 235175 AAGAAGCATTTTTATTGAATCAACAAATATTTGAAACAATTTATTATGGTGCTTTGGAAG 235116
Query 76338 CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGT 76397
| ||||||||||||||| ||| || | || || || | || || || | |
Sbjct 235115 CTAGTTGTGAATTGGCTAAAGAATTTGGGCCTTACGAAACTTACGAAGGAAGCCCTGTGA 235056
Query 76398 CCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAACT-ACGACTG 76455
|||| | ||||| | |||||||||| ||| || || | ||| || |||
Sbjct 235055 GTAAAGGTATTCTTCAATATGATATGTGG--------AACAAAACTCCTACTGACCTCTG 235004
Query 76456 GGA-TGTTCTCAA-GGAACGCATCAA--GGAGA--AGGGTCTTCGTAACAGTCTTTTGAT 76509
||| || | || || | | || | | | | ||| || | || |||| | ||
Sbjct 235003 GGATTGGGCAGAATTAAAAGGAAAAATTGCACAATATGGTGTTAGAAATTCTCTTCTTAT 234944
Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569
|| |||||||| ||||| || || || ||||| || || |||||||||| ||||||||
Sbjct 234943 TGCTCCAATGCCTACAGCATCAACAGCTCAAATATTAGGAAATAATGAATCTTTTGAACC 234884
Query 76570 ATACACAACAAACATCTA 76587
||| ||| | || || ||
Sbjct 234883 ATATACATCCAATATATA 234866
>SEQ24359
Length=906208
Score = 105 bits (116), Expect = 8e-18
Identities = 514/804 (64%), Gaps = 33/804 (4%)
Strand=Plus/Minus
Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858
|||| | ||||| |||| | | || ||||| |||||| | || |||| ||| ||| ||
Sbjct 359152 GGGTAAAGAGTTCGAAGACTTATATACAAAATATGAAAATGAAGGTAAAGCAAATAAAAC 359093
Query 75859 TGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
| |||| | ||||| || || | || |||| | || ||||| || ||
Sbjct 359092 AATCAAAGCCCAAGCACTTTGGTTTGCCATAGTGGAAGCACAAATTGAAACTGGGACTCC 359033
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
||||||||| || || || |||| || || ||||| ||| | ||||||||||| ||
Sbjct 359032 ATATATGCTATATAAAGACTCTTGCAATCGCAAAAGTAATCAACAAAATTTGGGAACTAT 358973
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
||| || ||| | ||||| ||||| | || || | | | ||||| || ||
Sbjct 358972 TAAGTGCAGTAATTTATGCACAGAAATAATTGAATATTCTGCTCCAGATGAAGTTGCCGT 358913
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGA--AGAGACTCGCACTTTT 76096
|||||| ||||| || || || || || ||||| ||| || || | |||| |
Sbjct 358912 TTGCAACTTGGCGTCTATAGCACT----AAATATGTTTGTGACCAGTGA-AAGAACTTAT 358858
Query 76097 GATTATGAAAAACTTCATGAAATCA-CAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155
|||| | | || ||| | | || | ||||| |||| || |||||| |||| | | ||
Sbjct 358857 GATTTTCAGAAGCTTAAATATATAAGCAAAG-TTGTGACTAAAAATTTAAATAAAATAAT 358799
Query 76156 TGACAGAAATTTTTATCCCGTTG--AGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213
||| | | |||| ||| || || || |||||| || | || || | |||
Sbjct 358798 TGATGTCACCTATTAT-CCGCTGCCCGA-AGCAAAAAAGTCAAACTTTCGCCATCGTCCT 358741
Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGAT 76273
|| ||| | ||||| || ||| | || ||| | |||||| || || ||| |||
Sbjct 358740 ATCGGTATTGGTGTGCAGGGTTTTGCTGATACTCTAATTTTGATGCGTTATCCATATGAA 358681
Query 76274 TCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTG 76333
| || |||| ||||| | || |||||||| || ||| | | | |
Sbjct 358680 ACTGAAAAAGCATTTTTATTGAATCAACAAATATTTGAAACAATTTATTATGGTGCTTTA 358621
Query 76334 GAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| | |||||||| |||||| ||| || | || || || | || || ||
Sbjct 358620 GAAGGTAGTTGTGAGTTGGCTAAAGAATTTGGGCCTTACGAAACTTACGAAGGAAGCCCT 358561
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTAC-GA 76452
| |||| | ||||||| |||||||||| ||| || ||| |||| ||
Sbjct 358560 GTAAGTAAAGGTATTCTTCAGTATGATATGTGG--------AACAAAACTC--CTACTGA 358511
Query 76453 ---CTGGGA-TGTTCTCAA--GGAACGCATCAAGG---AGAAGGGTCTTCGTAACAGTCT 76503
|||||| || || || || ||| | | | | ||| || | || |||
Sbjct 358510 TCTCTGGGATTGGTCAGAATTAAAAAGCAAAATTGCACAATATGGTGTTAGAAATTCTCT 358451
Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563
| | || || |||||||| ||||| || || || ||||| || || |||||||||| ||
Sbjct 358450 TCTTATCGCTCCAATGCCTACAGCATCAACAGCTCAAATATTAGGAAATAATGAATCTTT 358391
Query 76564 TGAACCATACACAACAAACATCTA 76587
||| ||||| ||| | || || ||
Sbjct 358390 TGAGCCATATACATCGAATATATA 358367
>seq8547
Length=35786
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 14356 TATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCA---TAA 14412
||||| |||||| | |||||| ||||||||||| |||| | | || || | |||
Sbjct 8778 TATGGTAGATGGTTTTAAGCCTGGTCAGAGGAAAGTTATGTTTACATGTTTTAAACGTAA 8719
Query 14413 GAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGC 14472
|| ||| | ||| | || || |||||| | | | | || || || | ||| ||
Sbjct 8718 CGAT---AAGAAGGAAGTTAAAGTAGCACAATTATCTGGTTCCGTAGCTGAAATGTCAGC 8662
Query 14473 GTACCACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACAC 14532
|| ||||||||||||||||| ||| || ||||| || ||||| | |||
Sbjct 8661 ATATCACCATGGTGAAGTATCATTACAAATGACAATTGTAAATTTGGCTCAAAACTTTGT 8602
Query 14533 GGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGT 14584
|| || ||||| ||||| | |||||||| |||||||||||||||| |||
Sbjct 8601 TGGATCCAACAATATTAATTTGCTTGAACCTCGTGGTCAATTTGGTACACGT 8550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596382113088960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |