Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value SEQ19298 147 3e-30 SEQ24359 105 8e-18 seq8547 95.1 1e-14 >SEQ19298 Length=518036 Score = 147 bits (162), Expect = 3e-30 Identities = 595/918 (65%), Gaps = 37/918 (4%) Strand=Plus/Minus Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 ||||| | |||| | || |||||||| || | || ||||| || ||||| | || Sbjct 235763 GAGATTTATTTTATGCACTTTGGATTCCTGATTTATTTATGAAACGTGTTGAAGCTAATG 235704 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT---GGGTG 75803 | ||||| ||| | || ||| |||| || || || | | ||| ||||| Sbjct 235703 AAAATTGGTCACTTATGTGCCCAAACAAATGTCCTGG---CTTGCATGAGGTTTGGGGTG 235647 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT-GTA 75862 | || ||||||| | || ||||| |||||| |||| |||||||| ||| || | || Sbjct 235646 AAGAATTTGAAGATTTATATACAAAATATGAAAAGGAAGGTAGAGCAAATA-GAGTAGTT 235588 Query 75863 CCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 ||| | | ||||| ||||| | || |||| || |||||||| || ||| Sbjct 235587 AAAGCACAAGCTCTTTGGTTTGCTATAATTGAAGCACAAGTTGAAACTGGAACTCCTTAT 235528 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| || |||||| | || || || ||||| ||| | ||||| |||||||||||| Sbjct 235527 ATGCTATATAAGGATTCATGCAATCGCAAAAGTAATCAACAAAATTTAGGAACAATCAAG 235468 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || ||| | ||||| ||||| | |||||| | | ||||| | || |||||| Sbjct 235467 TGCAGTAATTTATGCACAGAAATCGTTGAGTACTCTGCGCCAGATGAAATTGCAGTTTGC 235408 Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGA--AGAGACTCGCACTTTTGATT 76100 || ||||| || || || || || ||||| ||| || || | |||| ||| | Sbjct 235407 AACTTGGCTTCTATAGCACT----AAATATGTTTGTGACTAGTGA-TAAAACTTATGACT 235353 Query 76101 ATGAAAAACTTCATGAAATCA-CAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159 | | || ||| | | || | ||||| | || || | |||| |||| | | |||||| Sbjct 235352 TTCAGAAGCTTAAATATATAAGCAAAG-TCGTAACTAGAAATTTAAATAAAATAATTGAC 235294 Query 76160 AGAAATTTTTATCCCGTTG--AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217 ||| | ||| ||||||| || || |||||| || | | || |||||||| | Sbjct 235293 GTAAACTATTA-CCCGTTGCCCGA-AGCAAAAAAGTCAAACTTAAGGCATAGACCTATCG 235236 Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAG 76277 || | ||||| || || | || |||| | ||| | || || | | ||| | Sbjct 235235 GTATTGGTGTGCAGGGATTTGCAGATGCTCTAATTGTACTGCGTTATCCTTATGAAAGTG 235176 Query 76278 ATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGG 76337 | ||||| ||||| | || |||||||| || ||| | | | |||| | Sbjct 235175 AAGAAGCATTTTTATTGAATCAACAAATATTTGAAACAATTTATTATGGTGCTTTGGAAG 235116 Query 76338 CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGT 76397 | ||||||||||||||| ||| || | || || || | || || || | | Sbjct 235115 CTAGTTGTGAATTGGCTAAAGAATTTGGGCCTTACGAAACTTACGAAGGAAGCCCTGTGA 235056 Query 76398 CCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAACT-ACGACTG 76455 |||| | ||||| | |||||||||| ||| || || | ||| || ||| Sbjct 235055 GTAAAGGTATTCTTCAATATGATATGTGG--------AACAAAACTCCTACTGACCTCTG 235004 Query 76456 GGA-TGTTCTCAA-GGAACGCATCAA--GGAGA--AGGGTCTTCGTAACAGTCTTTTGAT 76509 ||| || | || || | | || | | | | ||| || | || |||| | || Sbjct 235003 GGATTGGGCAGAATTAAAAGGAAAAATTGCACAATATGGTGTTAGAAATTCTCTTCTTAT 234944 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 || |||||||| ||||| || || || ||||| || || |||||||||| |||||||| Sbjct 234943 TGCTCCAATGCCTACAGCATCAACAGCTCAAATATTAGGAAATAATGAATCTTTTGAACC 234884 Query 76570 ATACACAACAAACATCTA 76587 ||| ||| | || || || Sbjct 234883 ATATACATCCAATATATA 234866 >SEQ24359 Length=906208 Score = 105 bits (116), Expect = 8e-18 Identities = 514/804 (64%), Gaps = 33/804 (4%) Strand=Plus/Minus Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 |||| | ||||| |||| | | || ||||| |||||| | || |||| ||| ||| || Sbjct 359152 GGGTAAAGAGTTCGAAGACTTATATACAAAATATGAAAATGAAGGTAAAGCAAATAAAAC 359093 Query 75859 TGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 | |||| | ||||| || || | || |||| | || ||||| || || Sbjct 359092 AATCAAAGCCCAAGCACTTTGGTTTGCCATAGTGGAAGCACAAATTGAAACTGGGACTCC 359033 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 ||||||||| || || || |||| || || ||||| ||| | ||||||||||| || Sbjct 359032 ATATATGCTATATAAAGACTCTTGCAATCGCAAAAGTAATCAACAAAATTTGGGAACTAT 358973 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 ||| || ||| | ||||| ||||| | || || | | | ||||| || || Sbjct 358972 TAAGTGCAGTAATTTATGCACAGAAATAATTGAATATTCTGCTCCAGATGAAGTTGCCGT 358913 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGA--AGAGACTCGCACTTTT 76096 |||||| ||||| || || || || || ||||| ||| || || | |||| | Sbjct 358912 TTGCAACTTGGCGTCTATAGCACT----AAATATGTTTGTGACCAGTGA-AAGAACTTAT 358858 Query 76097 GATTATGAAAAACTTCATGAAATCA-CAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155 |||| | | || ||| | | || | ||||| |||| || |||||| |||| | | || Sbjct 358857 GATTTTCAGAAGCTTAAATATATAAGCAAAG-TTGTGACTAAAAATTTAAATAAAATAAT 358799 Query 76156 TGACAGAAATTTTTATCCCGTTG--AGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 ||| | | |||| ||| || || || |||||| || | || || | ||| Sbjct 358798 TGATGTCACCTATTAT-CCGCTGCCCGA-AGCAAAAAAGTCAAACTTTCGCCATCGTCCT 358741 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGAT 76273 || ||| | ||||| || ||| | || ||| | |||||| || || ||| ||| Sbjct 358740 ATCGGTATTGGTGTGCAGGGTTTTGCTGATACTCTAATTTTGATGCGTTATCCATATGAA 358681 Query 76274 TCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTG 76333 | || |||| ||||| | || |||||||| || ||| | | | | Sbjct 358680 ACTGAAAAAGCATTTTTATTGAATCAACAAATATTTGAAACAATTTATTATGGTGCTTTA 358621 Query 76334 GAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393 || | |||||||| |||||| ||| || | || || || | || || || Sbjct 358620 GAAGGTAGTTGTGAGTTGGCTAAAGAATTTGGGCCTTACGAAACTTACGAAGGAAGCCCT 358561 Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTAC-GA 76452 | |||| | ||||||| |||||||||| ||| || ||| |||| || Sbjct 358560 GTAAGTAAAGGTATTCTTCAGTATGATATGTGG--------AACAAAACTC--CTACTGA 358511 Query 76453 ---CTGGGA-TGTTCTCAA--GGAACGCATCAAGG---AGAAGGGTCTTCGTAACAGTCT 76503 |||||| || || || || ||| | | | | ||| || | || ||| Sbjct 358510 TCTCTGGGATTGGTCAGAATTAAAAAGCAAAATTGCACAATATGGTGTTAGAAATTCTCT 358451 Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 | | || || |||||||| ||||| || || || ||||| || || |||||||||| || Sbjct 358450 TCTTATCGCTCCAATGCCTACAGCATCAACAGCTCAAATATTAGGAAATAATGAATCTTT 358391 Query 76564 TGAACCATACACAACAAACATCTA 76587 ||| ||||| ||| | || || || Sbjct 358390 TGAGCCATATACATCGAATATATA 358367 >seq8547 Length=35786 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 14356 TATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCA---TAA 14412 ||||| |||||| | |||||| ||||||||||| |||| | | || || | ||| Sbjct 8778 TATGGTAGATGGTTTTAAGCCTGGTCAGAGGAAAGTTATGTTTACATGTTTTAAACGTAA 8719 Query 14413 GAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGC 14472 || ||| | ||| | || || |||||| | | | | || || || | ||| || Sbjct 8718 CGAT---AAGAAGGAAGTTAAAGTAGCACAATTATCTGGTTCCGTAGCTGAAATGTCAGC 8662 Query 14473 GTACCACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACAC 14532 || ||||||||||||||||| ||| || ||||| || ||||| | ||| Sbjct 8661 ATATCACCATGGTGAAGTATCATTACAAATGACAATTGTAAATTTGGCTCAAAACTTTGT 8602 Query 14533 GGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGT 14584 || || ||||| ||||| | |||||||| |||||||||||||||| ||| Sbjct 8601 TGGATCCAACAATATTAATTTGCTTGAACCTCGTGGTCAATTTGGTACACGT 8550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596382113088960