Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_020853.1
Length=56958
Score E
Sequences producing significant alignments: (Bits) Value
seq6046 208 3e-49
>seq6046
Length=8052
Score = 208 bits (230), Expect = 3e-49
Identities = 386/554 (70%), Gaps = 18/554 (3%)
Strand=Plus/Minus
Query 44347 GCGATAATCGCAGAACGCCTCAAAGGCCAGCGGGACCCATGATTTGCAGATGTCGGCTAT 44406
||| ||||| |||||| || |||||| || ||||| ||| ||| | | |
Sbjct 7234 GCGGTAATCCTCGAACGCGCCATAGGCCATGGGCACCCAATCCTTGACGATCTGGCACAG 7175
Query 44407 CGCATCGGCATAGACACGGACCTCTTTCTGGGCATGTTCATCGGCCCGCAGGCGCAGGAA 44466
|||||||| || || |||| || | || ||||| ||||||| ||||||||||||||
Sbjct 7174 GGCATCGGCGTAAACGCGGATTTCGTATTGCGCATGGGCATCGGCGCGCAGGCGCAGGAA 7115
Query 44467 GTGGAAGAGGTTGTGTAGGTCAATCTTCCAATACCATTGGGTGTAGACATTGACCGGCAA 44526
|||||| || ||||| ||||||||||||||||||||||| ||||||| ||| | ||||
Sbjct 7114 GTGGAACAGATTGTGCAGGTCAATCTTCCAATACCATTGCGTGTAGATGTTGGCGGGCAG 7055
Query 44527 GTTCATGCGGGCCAGTTCGCGGGCCAAG-CCGTCCTGAC-----CGTCAT-CGC--TGAT 44577
|||||||||||||||||||| || | | || | || | | |||| ||| | |
Sbjct 7054 ATTCATGCGGGCCAGTTCGCGCGCAAGGCCCATTTTGCCGCTGTCTTCATCCGCCGTCAG 6995
Query 44578 CATCTCTTCATAGTGATCATAGGCGTTCTGGGCGTCGTTCATCAGGTAGTGTAGGACCCG 44637
||| ||||| || || ||||||| | ||| || | |||| || || || ||
Sbjct 6994 CATGTCTTCGTAATGGTCATAGGACCGCATGGCATCTTCGCGCAGGATGTCCAGAACGCG 6935
Query 44638 CTGAGCCTCAGCCCCCTGAAGAACATTATCATCGCGGCCCTGCCCGTTCACCTTCGACTG 44697
||||| | |||||| | | || ||||||| || | | ||| ||
Sbjct 6934 GGCGGCCTC-GTCCCCTG--TCAGGGTTTCGCCGCGGCCTTGGTGGGTTTGGCGCGATTG 6878
Query 44698 GGATGCGAGATCTTGGGGACTTGGGATGTAGAACTCACCCGGCATGATCGAATAGCGGGC 44757
|| || | || || | ||||| ||||| |||| || || | ||| |||||
Sbjct 6877 GGCGGCCAATGCTCCGG--CGGGGGATATAGAATTCACGGTCCAGGAATG-ATAACGGGC 6821
Query 44758 TGAGTATTCATT-CACGTTGGCCGT-CCGGTGACGGATCCATTGGCGGGCCACAAACACG 44815
|| ||||| || ||||||||| || ||||| || ||||| ||||| ||||| |||||
Sbjct 6820 GGAATATTCGTTCCACGTTGGCGGTGTCGGTGGCGAATCCACTGGCGCGCCAC-GACACG 6762
Query 44816 GGCAGTTTGACATGAAGTTTGATCTCACAACCCTCAAACGGGCTGGTGTGCCAATGGCGC 44875
||||||||||| || || |||||||| || || || || || ||||||||||||
Sbjct 6761 GGCAGTTTGACGTGCAGCTTGATCTCGCACATTTCGAATGGTGAGGAATGCCAATGGCGC 6702
Query 44876 ATAAGGTAGCGGAT 44889
|| ||||| || ||
Sbjct 6701 ATCAGGTACCGTAT 6688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 182089618859680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |