Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq6046 208 3e-49 >seq6046 Length=8052 Score = 208 bits (230), Expect = 3e-49 Identities = 386/554 (70%), Gaps = 18/554 (3%) Strand=Plus/Minus Query 44347 GCGATAATCGCAGAACGCCTCAAAGGCCAGCGGGACCCATGATTTGCAGATGTCGGCTAT 44406 ||| ||||| |||||| || |||||| || ||||| ||| ||| | | | Sbjct 7234 GCGGTAATCCTCGAACGCGCCATAGGCCATGGGCACCCAATCCTTGACGATCTGGCACAG 7175 Query 44407 CGCATCGGCATAGACACGGACCTCTTTCTGGGCATGTTCATCGGCCCGCAGGCGCAGGAA 44466 |||||||| || || |||| || | || ||||| ||||||| |||||||||||||| Sbjct 7174 GGCATCGGCGTAAACGCGGATTTCGTATTGCGCATGGGCATCGGCGCGCAGGCGCAGGAA 7115 Query 44467 GTGGAAGAGGTTGTGTAGGTCAATCTTCCAATACCATTGGGTGTAGACATTGACCGGCAA 44526 |||||| || ||||| ||||||||||||||||||||||| ||||||| ||| | |||| Sbjct 7114 GTGGAACAGATTGTGCAGGTCAATCTTCCAATACCATTGCGTGTAGATGTTGGCGGGCAG 7055 Query 44527 GTTCATGCGGGCCAGTTCGCGGGCCAAG-CCGTCCTGAC-----CGTCAT-CGC--TGAT 44577 |||||||||||||||||||| || | | || | || | | |||| ||| | | Sbjct 7054 ATTCATGCGGGCCAGTTCGCGCGCAAGGCCCATTTTGCCGCTGTCTTCATCCGCCGTCAG 6995 Query 44578 CATCTCTTCATAGTGATCATAGGCGTTCTGGGCGTCGTTCATCAGGTAGTGTAGGACCCG 44637 ||| ||||| || || ||||||| | ||| || | |||| || || || || Sbjct 6994 CATGTCTTCGTAATGGTCATAGGACCGCATGGCATCTTCGCGCAGGATGTCCAGAACGCG 6935 Query 44638 CTGAGCCTCAGCCCCCTGAAGAACATTATCATCGCGGCCCTGCCCGTTCACCTTCGACTG 44697 ||||| | |||||| | | || ||||||| || | | ||| || Sbjct 6934 GGCGGCCTC-GTCCCCTG--TCAGGGTTTCGCCGCGGCCTTGGTGGGTTTGGCGCGATTG 6878 Query 44698 GGATGCGAGATCTTGGGGACTTGGGATGTAGAACTCACCCGGCATGATCGAATAGCGGGC 44757 || || | || || | ||||| ||||| |||| || || | ||| ||||| Sbjct 6877 GGCGGCCAATGCTCCGG--CGGGGGATATAGAATTCACGGTCCAGGAATG-ATAACGGGC 6821 Query 44758 TGAGTATTCATT-CACGTTGGCCGT-CCGGTGACGGATCCATTGGCGGGCCACAAACACG 44815 || ||||| || ||||||||| || ||||| || ||||| ||||| ||||| ||||| Sbjct 6820 GGAATATTCGTTCCACGTTGGCGGTGTCGGTGGCGAATCCACTGGCGCGCCAC-GACACG 6762 Query 44816 GGCAGTTTGACATGAAGTTTGATCTCACAACCCTCAAACGGGCTGGTGTGCCAATGGCGC 44875 ||||||||||| || || |||||||| || || || || || |||||||||||| Sbjct 6761 GGCAGTTTGACGTGCAGCTTGATCTCGCACATTTCGAATGGTGAGGAATGCCAATGGCGC 6702 Query 44876 ATAAGGTAGCGGAT 44889 || ||||| || || Sbjct 6701 ATCAGGTACCGTAT 6688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182089618859680