Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 136 7e-27 SEQ18478 132 9e-26 seq9966 127 4e-24 SEQ10383 87.8 3e-12 seq9382 86.0 1e-11 >SEQ18352 Length=541547 Score = 136 bits (150), Expect = 7e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||| ||| | ||||| ||| || ||||||||| || ||||| || | | | Sbjct 402416 CGCAGCACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGATAAAGTGCGACCA 402357 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || |||||||| || |||||||| | | |||||||| ||||| || || |||||| Sbjct 402356 TCCTCCAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGGAATGCCCTCTTTA 402297 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | ||| |||| |||| || | ||| || |||| || ||| Sbjct 402296 TCTTGAATCTTAGCTTTAACATTCTCAATACTATCAGATGGCTCGACCTCTAAGGTGATA 402237 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || | || || ||||| || ||||| Sbjct 402236 GTTTTACCGGTCAAAGTCTTGACAAAAATCTGCAT 402202 Score = 132 bits (146), Expect = 9e-26 Identities = 171/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | || || | ||||| ||| || |||| || || || || Sbjct 390988 ATTTGCATACCACCACGTAAACGCAATACCAAATGTAAAGTAGATTCCTTTTGGATGTTG 390929 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| || || | | ||| || | |||||| || ||||| ||||| | ||||||| Sbjct 390928 TAGTCGGACAAAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAGATTAAACGCTGTTGA 390869 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||||||||| ||||| | || | |||| ||| || || || Sbjct 390868 TCTGGGGGAATGCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATGGTGTCAGAT 390809 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || |||| ||| || ||||| || || | || || || || |||||||| Sbjct 390808 GGCTCGACCTCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 390753 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| |||| ||| | ||| | || || ||| ||||| || Sbjct 399695 ATACCACCGCGAAGACGAAGAACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAATCA 399636 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | | || || | ||| || || ||||| ||||| | |||||| || ||| Sbjct 399635 GACAAAGTACGACCGTCTTCAAGTTGCTTGCCAGCAAATATTAAACGCTGTTGGTCTGGA 399576 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| ||||||| || | |||| || ||||| || | ||| Sbjct 399575 GGAATACCTTCTTTATCTTGGATTTTGGCCTTAACATTTTCTATTGTATCAGATGCTTCA 399516 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | ||||| ||||| || |||| ||||| ||||| || ||||| Sbjct 399515 ACTTCCAATGTTATGGTTTTGCCAGTTAAAGTTTTAACAAAGATCTGCAT 399466 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || || | |||| ||| | || | || || ||||| ||||| Sbjct 390298 ATACCACCACGTAAACGCAAGACCAAATGGAGAGTTGATTCCTTTTGGATATTGTAGTCA 390239 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | | ||| || || || || || |||||||| || | ||||||||| || Sbjct 390238 GATAAGGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATCAAACGCTGTTGATCTGGT 390179 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| ||||| | ||| | || |||||||| || | ||| Sbjct 390178 GGAATACCTTCTTTATCTTGGATTTTAGCTTTGACGTTCTCGATAGTATCAGACGGCTCG 390119 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||| || ||||||||||| || | || |||||||| || ||||| Sbjct 390118 ACCTCTAAGGTGATAGTTTTACCGGTCAAAGTCTTTACAAAAATCTGCAT 390069 Score = 114 bits (126), Expect = 2e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || |||||||| | || | ||| || ||||| || || ||||||||||| | Sbjct 389111 AATGTTGTAGTCGGAGAGGGTACGCCCATCCTCCAATTGCTTACCAGCAAAAATTAAACG 389052 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||| || || || || ||||| ||||| || ||||| | || | |||| ||| || Sbjct 389051 TTGTTGGTCTGGTGGAATACCTTCCTTATCCTGAATTTTAGCCTTGACATTTTCAATGGT 388992 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||||| | ||| ||||| | ||| || |||||||| || | ||||| ||||| ||||| Sbjct 388991 GTCGGATGGCTCGACTTCCAAAGTAATGGTTTTACCAGTCAAAGTTTTCACAAAGATTTG 388932 Query 193358 CATTTT 193363 ||| || Sbjct 388931 CATGTT 388926 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| ||| | ||| | ||||| || || ||||| || | || | | ||| || Sbjct 402183 TACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATCTTC 402124 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 |||||||| || || ||||| || | ||||| || ||||| || |||||||||||||| Sbjct 402123 CAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATCTTG 402064 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 ||||||| || | || ||| || || || | || ||||| | || || ||||| Sbjct 402063 AATTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGTTTT 402004 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | |||||||||||||| ||||| Sbjct 402003 GCCAGTCAAGGTTTTTACAAATATCTGCAT 401974 Score = 104 bits (114), Expect = 4e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| |||||| |||| || || |||||| || || || | || | ||| || Sbjct 400359 TACCAAATGCAAAGTAGATTCCTTTTGAATATTGTAATCAGAGAGGGTACGTCCATCTTC 400300 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 |||||||| || || ||||| || | ||||| || ||||| || || ||||||||||| Sbjct 400299 CAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTG 400240 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 || |||| || | || ||| || || || | || ||||| | || |||||||| Sbjct 400239 AATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATAGTTTT 400180 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||||| |||||||| ||||| Sbjct 400179 GCCAGTCAAGGTTTTAACAAATATCTGCAT 400150 Score = 100 bits (110), Expect = 5e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| |||||| |||| || || |||||| || ||||| | || | ||| || Sbjct 400815 TACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTC 400756 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 ||||| || || || ||||| || | ||||| || ||||| || || ||||||||||| Sbjct 400755 CAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTG 400696 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 || |||| || | || ||| || || || | || ||||| | || || ||||| Sbjct 400695 AATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAACGTAATTGTTTT 400636 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||||| |||||||| ||||| Sbjct 400635 GCCAGTCAAGGTTTTAACAAATATCTGCAT 400606 Score = 100 bits (110), Expect = 5e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| |||||| |||| || || |||||| || ||||| | || | ||| || Sbjct 401727 TACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATCTTC 401668 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 ||||| || || || ||||| || | ||||| || ||||| || || ||||||||||| Sbjct 401667 CAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATCTTG 401608 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 || |||| || | || ||| || || || | || ||||| | || || ||||| Sbjct 401607 AATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAATGTAATTGTTTT 401548 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||||| |||||||| ||||| Sbjct 401547 GCCAGTCAAGGTTTTAACAAATATCTGCAT 401518 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || ||||| |||||||| | | ||| || || || || || || ||||| || | | Sbjct 389338 ATGTTGTAGTCAGATAACGTGCGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGC 389279 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || || |||||||||||||| || || | || | ||| ||| ||| Sbjct 389278 TGTTGGTCTGGGGGAATGCCTTCTTTATCTTGGATCTTAGCCTTGACGTTTTCAATTGTA 389219 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || | |||||||| | || || ||||| || || | || || || || |||||| Sbjct 389218 TCAGATGGTTCAACTTCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAAATTTGC 389159 Query 193359 AT 193360 || Sbjct 389158 AT 389157 >SEQ18478 Length=82247 Score = 132 bits (146), Expect = 9e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || || | |||| ||| | ||| | ||| || ||| || |||||| Sbjct 41409 ATACCACCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCG 41468 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || | ||| || || || ||||| || | |||||||| || Sbjct 41469 GATAAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGT 41528 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || |||||||| ||||| | || | |||| ||| || ||||||| |||| Sbjct 41529 GGAATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCA 41588 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| | ||| ||||| || || || | ||||| || ||||| |||||||| Sbjct 41589 ACTTCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTT 41641 >seq9966 Length=18433 Score = 127 bits (140), Expect = 4e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || | || || | |||| ||| | ||| | ||| || ||| || |||||| Sbjct 14120 ATACCTCCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCG 14179 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || | ||| || || || ||||| || | |||||||| || Sbjct 14180 GATAAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGT 14239 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || |||||||| ||||| | || | |||| ||| || ||||||| |||| Sbjct 14240 GGAATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCA 14299 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| | ||| ||||| || || || | ||||| || ||||| |||||||| Sbjct 14300 ACTTCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTT 14352 >SEQ10383 Length=35669 Score = 87.8 bits (96), Expect = 3e-12 Identities = 204/298 (68%), Gaps = 21/298 (7%) Strand=Plus/Plus Query 157575 tatttattttttataacaccaatttagtatttatttcgtat--tttt-----attataaa 157627 ||||||| | |||| ||| |||||| ||||||| | ||| |||| |||||| | Sbjct 21482 TATTTATATATTATTACAGTAATTTAATATTTATATA-TATGATTTTGACTGATTATACA 21540 Query 157628 acaatcatg---aattttatAAAATAATAAATA-TGATATAAA----AGACATATTTAAA 157679 | |||||| |||||||||| |||||| ||| | ||||| | | || || || Sbjct 21541 ATAATCATACACAATTTTATAATATAATATATAGTTTTATAATTTTTAAAATTAGTTTAA 21600 Query 157680 GCAT-TAGATTATGTAAATTATTAAGATATATATTTTTCATTAAAATTGTTAAAAAGAGA 157738 || || ||||| | |||||| | |||||||||||| ||| | | |||| | | Sbjct 21601 TAATATATATTATTTTAATTATCATAATATATATTTTTTTGTAATAATATTAATATTAAT 21660 Query 157739 AACAATTAAT-TAA--ACATTTATAATAAAATACATCGATGGATATATTACTTTTATAGA 157795 | |||| | ||| | ||| ||||||||||| || || |||||||| || || | Sbjct 21661 GAATATTATTATAATAATATTAATAATAAAATATATTATTGTATATATTATATTATTATA 21720 Query 157796 TAATAATAATTATGATTTTAATTAGGTTCTTTTACATATATATGGTATCttttttttt 157853 || ||| ||| ||| | | |||| || |||| ||||||| ||| | || |||| Sbjct 21721 TATTAA-AATAATGTTATATATTATTTTAATTTAATTATATATTTTATATGTTATTTT 21777 >seq9382 Length=868517 Score = 86.0 bits (94), Expect = 1e-11 Identities = 234/344 (68%), Gaps = 27/344 (8%) Strand=Plus/Plus Query 40057 CATAAAAAATAACATGGatattattgatatttatataaatttttcattttttaaat-tac 40115 |||||||||||| || | | ||| |||| |||| |||| || | | |||| || Sbjct 828106 CATAAAAAATAATATAAAAAATATATATATATATAAAAAT-----ATATATAAAATATAT 828160 Query 40116 atata-ataatataatttccataaatataat-gacaaatacattattatatataaaatgg 40173 ||||| |||| ||| | | ||||||||| | |||| | || |||| | ||||| Sbjct 828161 ATATATATAAAATA--TATAAAAAATATAATATATGAATAAAATA-TATA-AAAAAATAT 828216 Query 40174 aaatatataaaatttctagaaaaaattaaaccaaaaaatataa---ataaatGCATAGCC 40230 | ||||||||||| | || ||||||| | ||||||||||| | |||| ||| Sbjct 828217 ATATATATAAAATATATATAAAAAATATATATAAAAAATATAATATAAAAATATATATAT 828276 Query 40231 ATAGTATATGATAGAAAATGCAATGAAT-TAACAA--AATATAAATATTGTTATAATCAT 40287 | | |||||| | ||||| || || ||| || |||||||| || |||| | Sbjct 828277 AAAAAATATGAAAAAAAAT---ATATATATAAAAATTAATATAAAAATATATATATAAAA 828333 Query 40288 TATAAAATAATGAAAGAGTATTGTAATTTATATCATTATTGGAATAATAGATATAAATAT 40347 ||||||||| ||| | |||| || ||||| ||| || || | ||||||||| Sbjct 828334 TATAAAATA---AAACA-TATTTATATATATATATATATAAAAAAAAAATATATAAATA- 828388 Query 40348 CAAGATGTAGAATTATATAATTTAATAGATACAGAAATAAAAAT 40391 || || || | ||||||||| | || ||| | ||| ||||| Sbjct 828389 -AAAATATATACTTATATAATATTTTACATATATAAAATAAAAT 828431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899371661113440