Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19298 147 6e-30
SEQ23671 129 2e-24
SEQ24131 125 2e-23
seq1412 125 2e-23
seq7770 123 7e-23
seq5145 123 7e-23
SEQ19926 102 2e-16
seq3893 89.7 2e-12
>SEQ19298
Length=518036
Score = 147 bits (162), Expect = 6e-30
Identities = 720/1127 (64%), Gaps = 23/1127 (2%)
Strand=Plus/Plus
Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTC 155465
|| || || ||||| || |||||||||| || | |||||| | || | | ||| |
Sbjct 235211 TCTGCAAATCCCTGCACACCAATACCGATAGGTCTATGCCTTAAGTTTGACTTTTTTG-C 235269
Query 155466 TTCTTGTTT-GGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTT 155524
||| | |||||| | || || ||||| || |||||||||||| || | || ||
Sbjct 235270 TTCGGGCAACGGGTAATAGTTTACGTCAATTATTTTATTTAAATTTCTAGTTACGACTTT 235329
Query 155525 GGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAG 155584
| ||| | | | ||| | ||||| | |||||||| | | ||||||||| ||
Sbjct 235330 GCTTATATATTTAAGCTTCTGAAAGTCATAAGTTTTATCACTAGTCACAAACATATTTAG 235389
Query 155585 ACCAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCT 155643
| ||||| |||| || || || ||| | || | || || | ||| || || || |
Sbjct 235390 TGCTATAGAAGCCAAGTTGCAAACTGCAATTTCATCTGGCG-CAGAGTACTCAACGATTT 235448
Query 155644 CACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTAC 155703
| ||| | ||| | |||||| || |||||||| | || ||| ||| | || |
Sbjct 235449 CTGTGCATAAATTACTGCACTTGATTGTTCCTAAATTTTGTTGATTACTTTTGCGATTGC 235508
Query 155704 AAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTA 155763
| | |||||| ||||| || || || ||||| || || | ||||| || | || |
Sbjct 235509 ATGAATCCTTATATAGCATATAAGGAGTTCCAGTTTCAACTTGTGCTTCAATTATAGCAA 235568
Query 155764 GCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT--CAT 155821
||| || | | || |||| | | || ||| |||||| |||||||| ||
Sbjct 235569 ACCAAAGAGCTTGTGCTTTAACTACTCTATTTGCTCTACCTTCCTTTTCATATTTTGTAT 235628
Query 155822 ATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCA 155881
||| | | ||| | || ||||| || ||| || ||||| || || | |||||
Sbjct 235629 ATAAATC-TTC-AAATTCTTCACCCCAAACCTCATGCAAGCCAGGACATTTGTTTGGGCA 235686
Query 155882 AAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAAT 155941
| || |||||| ||| |||| | ||||| | |||||||| |||| |||||
Sbjct 235687 CATAAGTGACCAATTTTCATTAGCTTCAACACGTTTCATAAATAAATCAGGAATCCAAAG 235746
Query 155942 AGCATAGAAAAGGTCCCTTGC---CTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998
||||| || | || | || ||| || || | ||| ||||||| || ||
Sbjct 235747 TGCATAAAATAAATCTCGAGCGCGGTTT---TCTTCCTTACCGGTATTCTTCTTAAGATC 235803
Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCT 156058
|| ||||| ||||||| ||| || || ||||| || |||||| ||| ||
Sbjct 235804 TATAAATTCAAATATATCAGAATGCCAAGGTTCAAGATAAATTGCAAAAGCTCCAGGTCT 235863
Query 156059 CTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGG-AA 156114
|| ||||| || || ||||| | || ||||| || || | || ||| || |
Sbjct 235864 TTTACCACCACCTTGGTCAACATATCTTGCCACATTATTAAATACCCTTAACATTGGCAC 235923
Query 156115 TAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTAT 156174
|||| ||||| ||| ||||| ||||| ||| || || | | || ||
Sbjct 235924 TAAT-CCATTTGAAACACCATTTGTTCCTGATATAAACGTGCCTTTAGCTCTAATGCAAT 235982
Query 156175 GAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTAT 156234
||| || || |||||| ||||| | |||| || || ||| |||| | || | |
Sbjct 235983 GAACATTTAATCCAATGCCACCGGCTGATTTTGATATCATAGCACATTGTTCAACTGACT 236042
Query 156235 TGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAG 156294
||||||| |||||||| || ||| | |||| | || || | ||||| | ||| |
Sbjct 236043 TGAAAATTCCTTCAATTGAGTCAGCAACCATAGTAAGCAGGAAACACGATGAAAGTTGTG 236102
Query 156295 GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACA 156354
| | | || ||||| ||| || || || | ||||| |||| ||| | ||| |
Sbjct 236103 GCCTTCTAGTGGCAGCGGAGAACAGAGTTGGCGAGGCATGCGTAAAGTACCGTTCAGAGA 236162
Query 156355 TATAATCGTATGTCTC-CTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACC 156413
| || || || || || || | || | || | ||| || |||| || |||
Sbjct 236163 GAAGATTATAAGTTTCAATTGCTCCT-TCTATATCATTCCCATGTATACCAATTGAGCAT 236221
Query 156414 CTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCG 156473
|||||| ||| ||||| || | || |||| |||| || ||||| || |
Sbjct 236222 CTCATCAACAGGTGCTGGGGTCTTTCCACAACTTTCCCATTTATCTTGAGAAGATACGAT 236281
Query 156474 CGTTCCAGAGTTTTAAACCCGAAATAATCA-AACAGAAAATCACGGT 156519
||||| | |||||||| || || |||| | ||| | || |||||||
Sbjct 236282 CGTTCTAACGTTTTAAATCCAAAGTAATTATAACCG-AAGTCACGGT 236327
>SEQ23671
Length=176591
Score = 129 bits (142), Expect = 2e-24
Identities = 149/199 (75%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 289156 TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTT 289215
|||| |||| |||||||||||| ||||||||||| | |||| | ||| || |||||
Sbjct 145065 TGAAAAAATGGTACATTTGCTTCTCCTGCTACTGCACGTGCCAACAATGTTTTTCCTGTA 145124
Query 289216 CCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATT 289273
||||| || || | | || |||||| ||||||| ||| | ||| ||| || | |||
Sbjct 145125 CCAGGAGGACCAACAAGTAAAACTCCTTTTGGTAATTTACCACCA--AGATTTGAAAATT 145182
Query 289274 TCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATC 289333
| ||||| | ||||| ||||| || | ||| | |||||| | ||| || ||||| ||||
Sbjct 145183 TTTCAGGATTTTTTAAGAATTCCACCACTTCTTTAAGTTCTTGTTTGGCTTCATCGCATC 145242
Query 289334 CTGCTACATCAGCAAAAGT 289352
|| ||||||| |||| ||
Sbjct 145243 CTTTTACATCATCAAATGT 145261
>SEQ24131
Length=2407932
Score = 125 bits (138), Expect = 2e-23
Identities = 331/500 (66%), Gaps = 18/500 (4%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| | ||||| ||| ||| ||| || | |||||| | | ||||| |||
Sbjct 549545 CTATCAAATCGACCAGGTCGAAGTAAAGCTTTATCCAGTATATCTACACGATTTGTAGCT 549604
Query 288910 GCCAATACAACAATAGATTCGGTTTGCT--TAAATCCATCCATACTTGTTAAAATTTGAT 288967
|||| || || || ||| | | || | |||| |||||||| || | ||||
Sbjct 549605 GCCAGCACTAC--TACATTTGTTGTGGTATTAAACCCATCCATCTCAACCAACAACTGAT 549662
Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAAT---CGCTCCttt 289024
||||||| | ||| |||| || ||| | || ||| | ||| | ||
Sbjct 549663 TAAGTGTATTTTCTTGTTCAGAATG---ACCAC------CAAACGATTTTCCGCCACGTT 549713
Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAA 289084
|| ||||||||||||| ||||| ||||| || | | || || | || || || || |
Sbjct 549714 TTCTACCAACAGCATCTATTTCATCAATAAACAATATGCAAGGTGCATGTTTTCGTGCCA 549773
Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144
| ||||| | || | || || || | |||| ||||||| ||||||| | |||||||
Sbjct 549774 TCGCAAACATATCCCGCACTCGAGAAGGACCAACACCAACAAACATTTCCAAGAATTCAG 549833
Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204
|| | || || || || | |||||||||||| || ||| ||| | || | | ||
Sbjct 549834 AACCAGAAACGGTTATAAAAGGTACATTTGCTTCACCAGCTGTTGCTTTAGCTAACATTG 549893
Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264
| || ||||| ||||||||||| | | | || || || | ||| || || ||
Sbjct 549894 TTTTTCCTGTACCAGGTGGTCCAGTAAGCATTGCGCCTTTCGGAATTTTCGCACC-TAAG 549952
Query 289265 AC-TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323
| |||||| || || | ||||| || | ||||| ||| | |||| |||||||
Sbjct 549953 TCAATATATTGCTGTGGATTTTTTAAGAAGTTTACAAACTCCATGATTTCAATTTTTGCC 550012
Query 289324 TCATCACATCCTGCTACATC 289343
|| || || || ||||||||
Sbjct 550013 TCTTCGCAACCAGCTACATC 550032
>seq1412
Length=297351
Score = 125 bits (138), Expect = 2e-23
Identities = 215/309 (70%), Gaps = 6/309 (2%)
Strand=Plus/Minus
Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597
|||||| || || ||||||| || ||||| |||||| ||| || ||||||||
Sbjct 20606 ATTTCTAACAGTGCCATCATAATTAACCATAACAGACTCCATAGCCTTTATCAAACGACG 20547
Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657
|||||| ||||||||| || ||||||||||||||||| || ||||| ||||||||||
Sbjct 20546 CTGAATGTAACCAGTTTCAGCAGTTTTTACAGCTGTATCGATAAGACCTTCACGACCACC 20487
Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717
|||||| || ||| | | || ||| || || ||| | | || | || || ||
Sbjct 20486 CATAGCGTGAAAGTAAAATTCGGATGGTGTCAGACCGGCAAGATATGAATTTTCTACAAA 20427
Query 302718 ACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774
|| | | || || || ||||||| || | || ||||||| || | ||
Sbjct 20426 CCCTCTAGATTCAGGACCGTAATCGTC---TTTAATGAAATGTGGCAAAGTGCGCTTGCG 20370
Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTG 302834
| | ||||| || ||||| || || || ||||| ||||| |||| ||| | ||| | ||
Sbjct 20369 AAAACCGTACGGAATACGTTTACCTTCTACGTTTTGCTGACCCACGCAAGCAATAACTTG 20310
Query 302835 CGAAATATT 302843
||||| ||
Sbjct 20309 AGAAATGTT 20301
>seq7770
Length=38386
Score = 123 bits (136), Expect = 7e-23
Identities = 148/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 289156 TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTT 289215
|||| |||| |||||||||||| ||||||||||| | |||| | ||| || |||||
Sbjct 2855 TGAAAAAATGGTACATTTGCTTCTCCTGCTACTGCACGTGCCAACAATGTTTTTCCTGTA 2914
Query 289216 CCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATT 289273
||||| || || | | || |||||| || |||| ||| | ||| ||| || | |||
Sbjct 2915 CCAGGAGGACCAACAAGTAAAACTCCTTTAGGTAATTTACCACCA--AGATTTGAAAATT 2972
Query 289274 TCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATC 289333
| ||||| | ||||| ||||| || | ||| | |||||| | ||| || ||||| ||||
Sbjct 2973 TTTCAGGATTTTTTAAGAATTCCACCACTTCTTTAAGTTCTTGTTTGGCTTCATCGCATC 3032
Query 289334 CTGCTACATCAGCAAAAGT 289352
|| ||||||| |||| ||
Sbjct 3033 CTTTTACATCATCAAATGT 3051
>seq5145
Length=11382
Score = 123 bits (136), Expect = 7e-23
Identities = 211/306 (69%), Gaps = 0/306 (0%)
Strand=Plus/Minus
Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597
|||||| || || ||||||| || ||||| |||||| ||| || ||||||||
Sbjct 1051 ATTTCTAACAGTGCCATCATAATTAACCATAACAGACTCCATAGCCTTTATCAAACGACG 992
Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657
|||||||||||||||| || ||||| ||||||||||| || ||||| ||||||||||
Sbjct 991 CTGAATATAACCAGTTTCAGCAGTTTTGACAGCTGTATCGATAAGACCTTCACGACCACC 932
Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717
|||||| || ||| | | || ||| || || ||| | | || | || || ||
Sbjct 931 CATAGCGTGAAAGTAGAATTCGGATGGTGTCAGACCGGCAAGATATGAATTTTCTACAAA 872
Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777
|| | | || || || ||| || | || ||||||| || | || | |
Sbjct 871 CCCTCTAGATTCAGGACCATAATCGTCTTTAATGAAATGTGGCAAAGTGCGCTTGCGAAA 812
Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837
||||| || ||||| || || || ||||| ||||| |||| ||| | ||| | || ||
Sbjct 811 ACCGTACGGAATACGTTTACCTTCTACGTTTTGCTGACCCACGCAAGCAATAACTTGAGA 752
Query 302838 AATATT 302843
||| ||
Sbjct 751 AATGTT 746
>SEQ19926
Length=251428
Score = 102 bits (112), Expect = 2e-16
Identities = 251/375 (67%), Gaps = 13/375 (3%)
Strand=Plus/Plus
Query 381187 ATTATGACTGCGTGGAATCCTTGCCAGATTAATGATATGGCTTTACCACCTTGCCATATT 381246
|| ||| |||| |||||||| || | || | | ||||| ||||||| |||||| |
Sbjct 64047 ATAATGTCTGCATGGAATCCATGTGATATACCTAAAATGGCACTACCACCATGCCATTGT 64106
Query 381247 TTATGCCAGTTCAATGTTTCG--GCTGGTAATAAGTTAAGTTGTGCTTTATATCAGCGTA 381304
||| ||||| ||||| ||| || ||||| |||| |||||||||| |
Sbjct 64107 TTAGCTCAGTT-----TTTCGTAGCTAACGATGAGTTATCTTGTCAACTATATCAGCGCA 64161
Query 381305 GCGGTGATGTTGGTCTGGGTGTTCCATTCAATATTGCTTCGTATTCTATGCTTACTCGTT 381364
| | |||| | ||||| ||||||||||| |||||||| || ||| || | ||||| | |
Sbjct 64162 GTGCTGATATGGGTCTTGGTGTTCCATTTAATATTGCCTCTTATGCTTTACTTACGCATA 64221
Query 381365 TAATTGCTCATCACACTGGACTAATTGCGGGTGATTTTGTTTATTATCTCGGTAATACTC 381424
| ||||| ||| || ||| ||| | ||| |||||| | | | ||| |||| |
Sbjct 64222 TGATTGCGCATGTTACGGGATTAAAGCCTGGTTGTTTTGTACACACTATGGGTGATACGC 64281
Query 381425 ATATATACGACGACCATATTGAGAATTTAAAAGTTCAA--AAAACCAGGACACCATATGC 381482
|| |||| | | ||| | || |||||| | ||| |||| | | ||| ||
Sbjct 64282 ATGTATATAAGAATCATGTCGAACCTTTAAAGGAGCAACTTAAAC--GTATTCCAAGAGC 64339
Query 381483 GTTTCCAACGTTAGATATACTAAAT-ACTTACGATAATATTGAAGATTACACGGTTGATG 381541
||||||| || |||| | | | || | | ||||||||||| || ||||||
Sbjct 64340 TTTTCCAAAATTGCTTATAAAACGTGAAGTA-AAAAGTATTGAAGATTTTACCTTTGATG 64398
Query 381542 ATTTTAAACTAAATG 381556
||||| || ||| ||
Sbjct 64399 ATTTTGAAATAATTG 64413
>seq3893
Length=76654
Score = 89.7 bits (98), Expect = 2e-12
Identities = 117/160 (73%), Gaps = 4/160 (3%)
Strand=Plus/Minus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| | || ||||| |||||| |||||||||||||| | ||| | ||| || |||
Sbjct 69430 GCACCATAAGAAATCAAACAATCCCGTTCCATTTCACCCAAACGTAAACCGCCTTCAC-- 69373
Query 233333 GAC--CTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAAT 233390
||| | ||| || | ||||||||||| |||| ||||||| ||||||| ||
Sbjct 69372 GACTGCGACCTTGTGTGGGTTGACGAGTTAGCACAGCCTTTGGACCACGAGCACGTGCAT 69313
Query 233391 TAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATA 233430
|||||||| | |||||||| |||| | || ||||||
Sbjct 69312 GCATTTTATCCTGTACCATATGTTTCAATTTCTGATAATA 69273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471343480636854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |