Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value SEQ23554 129 5e-25 SEQ18352 104 2e-17 >SEQ23554 Length=126953 Score = 129 bits (142), Expect = 5e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||||||||| || ||||| || || ||||| || || || ||||| || || ||| | Sbjct 89651 TTGTAATCGAATTGTGTTTGTGCACCTAGCTCACAACCAAAATACTTAGTGGGATAAGTA 89710 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || ||||| || | || || | ||| | ||||||||| || ||||| || || || Sbjct 89711 GCTGGACGACCGATGGCTCGTGCAACTTCAGCCATGTTGACAATAACAGTTTTAATACCA 89770 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || ||||| ||||||||||| || || || ||||||||||| || ||||| ||| Sbjct 89771 TTACCCTTGCCTTCGACCTTAGCTTGTATACGAGGCATTTTGTAACGATAGAAAATGTCA 89830 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCT 34650 | |||||||| |||| ||| || | |||||| | ||| Sbjct 89831 GTGACATTGCGATTAATGTTAACGGAACCCATCTTTGCT 89869 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 |||||||| ||||||||||| ||||| | |||||| | | ||| || || || Sbjct 89352 GGCGGGTTCTTCAGTATGAATGTGTTAACCTTATGATTAACTTTAAGCAGACCATGGAAA 89411 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 || || ||||| || |||| ||||| | | || || || || || | | |||||| Sbjct 89412 CCACACGCTTTACAAGCCTGCGAGATAGTTTGATTCTTTGCTGAAACAGTTAAATCAGTC 89471 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 ||||| || || ||||| |||||||| ||||| || || || ||||||||||||| || Sbjct 89472 TCCGGATTATCGCATTCTGGACACAAAACAAATTTTCGTATAAAACCATCAAGCAAATCT 89531 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || || || | | || || || || ||||| ||||| ||||| || Sbjct 89532 TGCAATTTGCCAGCATCATGCGAACCATTGACAATGAAACGTTCATT 89578 >SEQ18352 Length=541547 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| ||||||||||||||||| || || |||||||| || | ||| || || Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | |||||| || ||| ||||||||||| | || |||||| Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | ||| || ||||| || || |||| | || | | || |||||| Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || |||||||| ||||| |||||||| | || || || || Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGTGTTACGTCTACGTGGTGG 399920 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 || || |||||||| ||||| |||||||| || || ||||||||||| | ||| ||| Sbjct 388923 TTCAACATGCAAATCTTTGTGAAAACTTTGACTGGTAAAACCATTACTTTGGAAGTCGAG 388982 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 || ||| || | | | || || || ||| || || ||||| | || Sbjct 388983 CCATCCGACACCATTGAAAATGTCAAGGCTAAAATTCAGGATAAGGAAGGTATTCCACCA 389042 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 || |||||| | | |||| ||| ||||| || ||||||||| | || | | || Sbjct 389043 GACCAACAACGTTTAATTTTTGCTGGTAAGCAATTGGAGGATGGGCGTACCCTCTCCGAC 389102 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 |||||||||||||| ||||| || | ||| |||| || Sbjct 389103 TACAACATTCAAAAGGAATCAACTCTCCACTTGGTCTT 389140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412715097851006