Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23554 129 5e-25
SEQ18352 104 2e-17
>SEQ23554
Length=126953
Score = 129 bits (142), Expect = 5e-25
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491
|||||||||| || ||||| || || ||||| || || || ||||| || || ||| |
Sbjct 89651 TTGTAATCGAATTGTGTTTGTGCACCTAGCTCACAACCAAAATACTTAGTGGGATAAGTA 89710
Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551
|| ||||| || | || || | ||| | ||||||||| || ||||| || || ||
Sbjct 89711 GCTGGACGACCGATGGCTCGTGCAACTTCAGCCATGTTGACAATAACAGTTTTAATACCA 89770
Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611
|| ||||| ||||||||||| || || || ||||||||||| || ||||| |||
Sbjct 89771 TTACCCTTGCCTTCGACCTTAGCTTGTATACGAGGCATTTTGTAACGATAGAAAATGTCA 89830
Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCT 34650
| |||||||| |||| ||| || | |||||| | |||
Sbjct 89831 GTGACATTGCGATTAATGTTAACGGAACCCATCTTTGCT 89869
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263
|||||||| ||||||||||| ||||| | |||||| | | ||| || || ||
Sbjct 89352 GGCGGGTTCTTCAGTATGAATGTGTTAACCTTATGATTAACTTTAAGCAGACCATGGAAA 89411
Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323
|| || ||||| || |||| ||||| | | || || || || || | | ||||||
Sbjct 89412 CCACACGCTTTACAAGCCTGCGAGATAGTTTGATTCTTTGCTGAAACAGTTAAATCAGTC 89471
Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383
||||| || || ||||| |||||||| ||||| || || || ||||||||||||| ||
Sbjct 89472 TCCGGATTATCGCATTCTGGACACAAAACAAATTTTCGTATAAAACCATCAAGCAAATCT 89531
Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
|| || || | | || || || || ||||| ||||| ||||| ||
Sbjct 89532 TGCAATTTGCCAGCATCATGCGAACCATTGACAATGAAACGTTCATT 89578
>SEQ18352
Length=541547
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| ||||||||||||||||| || || |||||||| || | ||| || ||
Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | |||||| || ||| ||||||||||| | || ||||||
Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | ||| || ||||| || || |||| | || | | || ||||||
Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || |||||||| ||||| |||||||| | || || || ||
Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGTGTTACGTCTACGTGGTGG 399920
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326
|| || |||||||| ||||| |||||||| || || ||||||||||| | ||| |||
Sbjct 388923 TTCAACATGCAAATCTTTGTGAAAACTTTGACTGGTAAAACCATTACTTTGGAAGTCGAG 388982
Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386
|| ||| || | | | || || || ||| || || ||||| | ||
Sbjct 388983 CCATCCGACACCATTGAAAATGTCAAGGCTAAAATTCAGGATAAGGAAGGTATTCCACCA 389042
Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446
|| |||||| | | |||| ||| ||||| || ||||||||| | || | | ||
Sbjct 389043 GACCAACAACGTTTAATTTTTGCTGGTAAGCAATTGGAGGATGGGCGTACCCTCTCCGAC 389102
Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484
|||||||||||||| ||||| || | ||| |||| ||
Sbjct 389103 TACAACATTCAAAAGGAATCAACTCTCCACTTGGTCTT 389140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412715097851006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |