Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq4741 232 3e-56 >seq4741 Length=15116 Score = 232 bits (256), Expect = 3e-56 Identities = 496/729 (68%), Gaps = 23/729 (3%) Strand=Plus/Plus Query 67568 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 67627 ||| |||||||||| || | ||||| ||| || || ||||| || || ||||| Sbjct 13626 ATTTCCACCGGCTCCATCGGGCTGGATATCGCGCTGGGGATCGGCGGCATGCCCCGGGGC 13685 Query 67628 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 67687 || | || |||||||| || || || || || ||| | || | ||| || | Sbjct 13686 CGCATTGTCGAGATCTATGGCCCGGAAAGCTCGGGCAAGACCACACTTGCCCTGCATGTT 13745 Query 67688 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 67747 ||||| | ||||||||| || |||| || ||||| |||||| ||||||||| | ||| Sbjct 13746 CTGGCCGAAGCCCAGAAGAAGGGCGGCACCGTCGCCTTCATCGATGCCGAACATGCGCTC 13805 Query 67748 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 67807 ||||| | |||||| ||||| || || ||||| | || | | ||||| Sbjct 13806 GACCCCGGTTACGCCCGCAAACTCGGCGTCAATATCGACGACCTTCTCCTGAGCCAGCCG 13865 Query 67808 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCC 67867 || | ||||| ||||| ||||| |||| || |||||| || |||| || | Sbjct 13866 GATGCCGGCGAACAGGCTCTGGAAATCGCCGATACGCTCGTCCGTTCCGGCGCCGTGGAC 13925 Query 67868 ATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATC 67927 | | || |||||||| || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 13926 GTTCTGGTCGTGGACTCCGTTGCGGCTCTCGTCCCGCGCGCCGAGCTTGAAGGCGACATG 13985 Query 67928 GGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACC 67987 || ||| || || || ||||| ||||| || ||| ||||| ||||||||||||| Sbjct 13986 GGCGACAGCCATGTTGGTCTGCACGCCCGTCTCATGAGCCAGGCTCTGCGCAAGCTGACG 14045 Query 67988 GGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATC 68047 || ||| | | || ||||||||||| | | |||| ||| | || ||| ||| Sbjct 14046 GGAACGGTCTCGCGCTCCAACACGCTCGTGATCTTCCTGAACCAGATCCGTATGAAAATC 14105 Query 68048 GGCAACGTGGGCTACGGC---CCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTC 68104 || |||| | |||| ||| ||||| ||||| || || || || ||| ||| Sbjct 14106 GG---CGTGATGTTCGGCAATCCG---GAGACGACCACGGGCGGCAACGC-CTG-AATTC 14157 Query 68105 TACGCCTCGGTGCGTATGGAT-GTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 68163 ||| |||| | || || || |||||| | ||| | || | ||| || |||| Sbjct 14158 TACCCCTCCATCCGCCTGAATACGCCGCAGCCGCTCCA-CAAGGACAAAG--GACGAGGT 14214 Query 68164 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCA 68223 || |||| ||| || ||||| ||||| |||||||||||| |||| || ||| ||| || Sbjct 14215 TG-CGGC-ACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCCCCCCCGTTCCGTCA 14272 Query 68224 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGA---GGCCGAACTCCTCGA 68280 || ||||| |||| | || ||||| ||||| | || | || |||||| ||||| Sbjct 14273 GGTCGAGTTCGACATCATGTATGGCGAAGGCAT---CAGCAAGATGGGCGAACTGCTCGA 14329 Query 68281 CATGGCCGT 68289 ||| ||| Sbjct 14330 TCTGGGCGT 14338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247373776957536