Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 100 2e-16
>SEQ18352
Length=541547
Score = 100 bits (110), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCAT 34823
|| ||||| |||| || || | |||||||||||||||||||| || | | |||| |||
Sbjct 391421 CAAGACCAAATGAAGTGTTGAT-TCCTTCTGAATGTTATAGTCAGACAAGGTGCGACCAT 391363
Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883
| |||| ||||| || ||||| |||| || ||||| ||| | || | ||||| ||||
Sbjct 391362 CTTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGT 391303
Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| | || || ||| || | | || | ||| | || || || | || ||||
Sbjct 391302 CTTGGATCTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATGG 391243
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || || || | ||||||||| |||||||||||
Sbjct 391242 TTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 391209
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||||||||| || || || || ||| |||| |||| |||| ||| || || || ||
Sbjct 401252 TCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCTTCCAATTGTTTACCAGCAAAT 401193
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||||| |||||| | || | ||||| ||||| | ||||| ||||||
Sbjct 401192 ATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTC 401133
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || ||| | ||||| || | || |||||||| || || ||||| || |||
Sbjct 401132 TCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGTCTTGCCGGTCAGGGTTTTAACA 401073
Query 34967 AAGATCTGCAT 34977
|| ||||||||
Sbjct 401072 AATATCTGCAT 401062
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| |||| ||| |||||||| ||||| ||||| |||| | | || |||| |||
Sbjct 390505 ACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCTTCC 390446
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| ||||| || ||||| |||| || ||||| ||| | || | ||||| ||||| |
Sbjct 390445 AACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGA 390386
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
||||| ||||| | | || | ||| | || || || | || ||||| ||
Sbjct 390385 ATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTG 390326
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | ||||| ||||||||||||||
Sbjct 390325 CCAGTCAAAGTCTTGACAAAGATCTGCAT 390297
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| || || | || |||| || ||||| || || || |||
Sbjct 399884 TCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAG 399825
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || ||||| || ||| |||| | || || ||||| | ||||| ||| || |
Sbjct 399824 ATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCTTGAATTTTAGATTTTACATTT 399765
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
|||| | || | || || || | || ||||| ||||| || | || || |||
Sbjct 399764 TCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTTGACA 399705
Query 34967 AAGATCTGCAT 34977
|| ||||||||
Sbjct 399704 AATATCTGCAT 399694
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/215 (69%), Gaps = 12/215 (6%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| |||| ||| |||||||||||||| || || || || | || |||| |||
Sbjct 400130 ACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCTTCC 400071
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| ||| || ||||| || |||| ||||| || ||| | || | ||||| ||||| |
Sbjct 400070 AATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCTTGA 400011
Query 34889 ATTTTTTGTTTGACG-----GATGCTATC-GATTCATTGGCCTCGACATCAACGGTTATG 34942
||||| || ||| |||||||| ||| | ||||| || | ||| ||
Sbjct 400010 ATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTGATA 399957
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || | ||||||||||| ||||||||
Sbjct 399956 GTTTTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 399922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325593001822898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |