Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 100 2e-16 >SEQ18352 Length=541547 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCAT 34823 || ||||| |||| || || | |||||||||||||||||||| || | | |||| ||| Sbjct 391421 CAAGACCAAATGAAGTGTTGAT-TCCTTCTGAATGTTATAGTCAGACAAGGTGCGACCAT 391363 Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883 | |||| ||||| || ||||| |||| || ||||| ||| | || | ||||| |||| Sbjct 391362 CTTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGT 391303 Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | | || || ||| || | | || | ||| | || || || | || |||| Sbjct 391302 CTTGGATCTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATGG 391243 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || || | ||||||||| ||||||||||| Sbjct 391242 TTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 391209 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || || || || ||| |||| |||| |||| ||| || || || || Sbjct 401252 TCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCTTCCAATTGTTTACCAGCAAAT 401193 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||| |||||| | || | ||||| ||||| | ||||| |||||| Sbjct 401192 ATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTC 401133 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || ||| | ||||| || | || |||||||| || || ||||| || ||| Sbjct 401132 TCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGTCTTGCCGGTCAGGGTTTTAACA 401073 Query 34967 AAGATCTGCAT 34977 || |||||||| Sbjct 401072 AATATCTGCAT 401062 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| |||| ||| |||||||| ||||| ||||| |||| | | || |||| ||| Sbjct 390505 ACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCTTCC 390446 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||| || ||||| |||| || ||||| ||| | || | ||||| ||||| | Sbjct 390445 AACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGA 390386 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| ||||| | | || | ||| | || || || | || ||||| || Sbjct 390385 ATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTG 390326 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| |||||||||||||| Sbjct 390325 CCAGTCAAAGTCTTGACAAAGATCTGCAT 390297 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || | || |||| || ||||| || || || ||| Sbjct 399884 TCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAG 399825 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| || ||| |||| | || || ||||| | ||||| ||| || | Sbjct 399824 ATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCTTGAATTTTAGATTTTACATTT 399765 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | || | || || || | || ||||| ||||| || | || || ||| Sbjct 399764 TCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTTGACA 399705 Query 34967 AAGATCTGCAT 34977 || |||||||| Sbjct 399704 AATATCTGCAT 399694 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| |||| ||| |||||||||||||| || || || || | || |||| ||| Sbjct 400130 ACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCTTCC 400071 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||| || ||||| || |||| ||||| || ||| | || | ||||| ||||| | Sbjct 400070 AATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCTTGA 400011 Query 34889 ATTTTTTGTTTGACG-----GATGCTATC-GATTCATTGGCCTCGACATCAACGGTTATG 34942 ||||| || ||| |||||||| ||| | ||||| || | ||| || Sbjct 400010 ATTTTAGCCTTAACGTTCTCAATGCTATCAGAT------GGTTCGACCTCTAAGGTGATA 399957 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || | ||||||||||| |||||||| Sbjct 399956 GTTTTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 399922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325593001822898