Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value SEQ18560 89.7 7e-13 SEQ21363 86.0 8e-12 SEQ19160 86.0 8e-12 >SEQ18560 Length=475018 Score = 89.7 bits (98), Expect = 7e-13 Identities = 79/96 (82%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 201565 TACGTATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGT 201623 ||||||||||| ||||||||||||||||| |||| | |||||| ||||||| || || Sbjct 393216 TACGTATACCACAAATTGGAGATAAATTTGCTTCTCGCCATGGCC-AAAAAGGTACGTGC 393158 Query 201624 GGTATGATTTATGCACAAGAAGATATGCCGTTTACA 201659 ||||| ||| ||||||||||||||||||||| Sbjct 393157 GGTATACAATATCGGCAAGAAGATATGCCGTTTACA 393122 >SEQ21363 Length=85545 Score = 86.0 bits (94), Expect = 8e-12 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 41957 AATGAAGAATACACAACATGTGGTACAGCATGTCCATTAACTTGTGAAAAACCAAAAGTT 42016 ||||| ||| |||| |||||| || || |||||| |||||||||||||| ||| | Sbjct 12465 AATGAGGAACCTACAATATGTGGCACTGCTTGTCCACCGACTTGTGAAAAACCTCAAG-T 12407 Query 42017 GGAG-TGTGTACTTTACAATGTGTTATTGGATGTAGATGTAAAGAAGGTTACTTAC 42071 |||| |||||||||| ||||| || | || ||| | |||||| | |||||| ||| Sbjct 12406 GGAGTTGTGTACTTTCCAATGCATTGTGGGTTGTCGGTGTAAAAACGGTTACATAC 12351 >SEQ19160 Length=94237 Score = 86.0 bits (94), Expect = 8e-12 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 201577 AAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTATGATTTAT 201635 ||||||| || || ||| |||| | |||||| ||||||||||||| ||||| ||| Sbjct 70090 AAATTGGCGACAAGTTTGCTTCTCGTCATGGCC-AAAAAGGAACTTGCGGTATTCAATAT 70032 Query 201636 GCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTATAATCAATCCA 201695 || ||||||||||| |||||| | || || ||||| |||||||| || ||||| Sbjct 70031 CGGCACGAAGATATGCCTTTTACAAAGGACGGGATTACCCCCGATATTATCATAAATCCT 69972 Query 201696 AATTGTATACCATCAAGAATGACCAT 201721 || ||| ||||| | ||||| || Sbjct 69971 CATGCTATTCCATCTCGTATGACAAT 69946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655074061878000