Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18560 89.7 7e-13
SEQ21363 86.0 8e-12
SEQ19160 86.0 8e-12
>SEQ18560
Length=475018
Score = 89.7 bits (98), Expect = 7e-13
Identities = 79/96 (82%), Gaps = 2/96 (2%)
Strand=Plus/Minus
Query 201565 TACGTATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGT 201623
||||||||||| ||||||||||||||||| |||| | |||||| ||||||| || ||
Sbjct 393216 TACGTATACCACAAATTGGAGATAAATTTGCTTCTCGCCATGGCC-AAAAAGGTACGTGC 393158
Query 201624 GGTATGATTTATGCACAAGAAGATATGCCGTTTACA 201659
||||| ||| |||||||||||||||||||||
Sbjct 393157 GGTATACAATATCGGCAAGAAGATATGCCGTTTACA 393122
>SEQ21363
Length=85545
Score = 86.0 bits (94), Expect = 8e-12
Identities = 90/116 (78%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 41957 AATGAAGAATACACAACATGTGGTACAGCATGTCCATTAACTTGTGAAAAACCAAAAGTT 42016
||||| ||| |||| |||||| || || |||||| |||||||||||||| ||| |
Sbjct 12465 AATGAGGAACCTACAATATGTGGCACTGCTTGTCCACCGACTTGTGAAAAACCTCAAG-T 12407
Query 42017 GGAG-TGTGTACTTTACAATGTGTTATTGGATGTAGATGTAAAGAAGGTTACTTAC 42071
|||| |||||||||| ||||| || | || ||| | |||||| | |||||| |||
Sbjct 12406 GGAGTTGTGTACTTTCCAATGCATTGTGGGTTGTCGGTGTAAAAACGGTTACATAC 12351
>SEQ19160
Length=94237
Score = 86.0 bits (94), Expect = 8e-12
Identities = 108/146 (74%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 201577 AAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTATGATTTAT 201635
||||||| || || ||| |||| | |||||| ||||||||||||| ||||| |||
Sbjct 70090 AAATTGGCGACAAGTTTGCTTCTCGTCATGGCC-AAAAAGGAACTTGCGGTATTCAATAT 70032
Query 201636 GCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTATAATCAATCCA 201695
|| ||||||||||| |||||| | || || ||||| |||||||| || |||||
Sbjct 70031 CGGCACGAAGATATGCCTTTTACAAAGGACGGGATTACCCCCGATATTATCATAAATCCT 69972
Query 201696 AATTGTATACCATCAAGAATGACCAT 201721
|| ||| ||||| | ||||| ||
Sbjct 69971 CATGCTATTCCATCTCGTATGACAAT 69946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655074061878000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |