Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 98.7 1e-15
>SEQ18352
Length=541547
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || |||||||| || ||||| ||| || || ||| | || || |||||||||||
Sbjct 390037 GTAGATTCTTTCTGGATGTTGTAGTCGGACAAAGTACGACCA-TCTTCAAGCTGCTTGCC 389979
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | |||||||| || || || |||||||| ||||| ||| || |||
Sbjct 389978 AGCGAAAATCAAACGCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGGATTTTAGCCTT 389919
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| || || | || || || || | || | ||||||||| |||| ||
Sbjct 389918 AACATTTTCAATTGTATCAGATGGTTCAACCTCCAAAGTAATGGTTTTGCCAGTCAAGGT 389859
Query 133643 TTTTACGAAAATCTGCAT 133660
|||||||| ||||||||
Sbjct 389858 CTTTACGAAGATCTGCAT 389841
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||||| ||||||||||| ||||| || | ||| ||| | || || |
Sbjct 402179 AAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCA-TCTTCCAA 402121
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| || || ||| |||| | || || ||||| ||||| |||||||| || || |||
Sbjct 402120 TTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATC-TTGAA 402062
Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| | ||||| | ||||| |||||| | | || || || | || | ||||||||
Sbjct 402061 TTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGTTTTGC 402002
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| |||||||| || ||||||||
Sbjct 402001 CAGTCAAGGTTTTTACAAATATCTGCAT 401974
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || ||||||||||| ||| |||| | ||||| || || ||||| || ||||| |||
Sbjct 389767 TCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTG 389708
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| |||| | |||| ||||| | ||||| || || | || | |
Sbjct 389707 TCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATG 389648
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||| |||| ||| || ||||| || |||||
Sbjct 389647 GTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 389613
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || ||||||||||| ||| |||| | ||||| || || ||||| || ||||| |||
Sbjct 391135 TCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTG 391076
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| |||| | |||| ||||| | ||||| || || | || | |
Sbjct 391075 TCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATG 391016
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||| |||| ||| || ||||| || |||||
Sbjct 391015 GTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 390981
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| ||||| ||||| | ||| ||| | ||||| |
Sbjct 402407 AAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGATAAAGTGCGACCA-TCCTCCAA 402349
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| ||||| || ||||||| || || || || ||||| ||||| || || || ||
Sbjct 402348 TTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGGAATGCCCTCTTTATCTTGAAT 402289
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | | ||||| | || | ||||| || || | ||||| ||||| |
Sbjct 402288 CTTA-GCTTTAACATTCTCAATACTATCAGATGGCTCGACCTCTAAGGTGATAGTTTTAC 402230
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||| || || |||||||||||
Sbjct 402229 CGGTCAAAGTCTTGACAAAAATCTGCAT 402202
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || || || || |||||||| || | ||| ||| | || || |
Sbjct 390274 AAATGGAGAGTTGATTCCTTTTGGATATTGTAGTCAGATAAGGTGCGACCA-TCTTCCAA 390216
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || |||| | ||||| || || || || || ||||| || || |||
Sbjct 390215 CTGCTTACCAGCAAAAATCAAACGCTGTTGATCTGGTGGAATACCTTCTTTATCTTGGAT 390156
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | ||| | || || | ||||| || || | ||||| ||||| |
Sbjct 390155 -TTTAGCTTTGACGTTCTCGATAGTATCAGACGGCTCGACCTCTAAGGTGATAGTTTTAC 390097
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||| ||||| |||||||||||
Sbjct 390096 CGGTCAAAGTCTTTACAAAAATCTGCAT 390069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483268872928080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |