Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23549 104 7e-19
seq7745 104 7e-19
SEQ18171 100 9e-18
SEQ14570 100 9e-18
seq2118 100 9e-18
seq1861 100 9e-18
SEQ24109 98.7 3e-17
SEQ23920 98.7 3e-17
SEQ20262 98.7 3e-17
SEQ18693 98.7 3e-17
SEQ18692 98.7 3e-17
seq7357 98.7 3e-17
seq4304 98.7 3e-17
>SEQ23549
Length=64047
Score = 104 bits (114), Expect = 7e-19
Identities = 71/79 (90%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 2763 TTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821
|||||| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 62245 TTTATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGG 62304
Query 2822 TTCAACCCCGGGCTTCAGC 2840
||||| |||||| ||| ||
Sbjct 62305 TTCAATCCCGGGTTTCGGC 62323
>seq7745
Length=118053
Score = 104 bits (114), Expect = 7e-19
Identities = 71/79 (90%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 2763 TTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821
|||||| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 14456 TTTATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGG 14515
Query 2822 TTCAACCCCGGGCTTCAGC 2840
||||| |||||| ||| ||
Sbjct 14516 TTCAATCCCGGGTTTCGGC 14534
>SEQ18171
Length=55696
Score = 100 bits (110), Expect = 9e-18
Identities = 71/81 (88%), Gaps = 3/81 (4%)
Strand=Plus/Plus
Query 2763 TTTATGG---CTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCT 2819
||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 5455 TTTATGGGAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCC 5514
Query 2820 GGTTCAACCCCGGGCTTCAGC 2840
||||||| |||||| ||| ||
Sbjct 5515 GGTTCAATCCCGGGTTTCGGC 5535
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 6497 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 6438
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 6437 CCGGGTTTCGGC 6426
>SEQ14570
Length=19540
Score = 100 bits (110), Expect = 9e-18
Identities = 69/77 (90%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 2765 TATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823
|||| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 11497 TATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTT 11438
Query 2824 CAACCCCGGGCTTCAGC 2840
||| |||||| ||| ||
Sbjct 11437 CAATCCCGGGTTTCGGC 11421
>seq2118
Length=40133
Score = 100 bits (110), Expect = 9e-18
Identities = 71/81 (88%), Gaps = 3/81 (4%)
Strand=Plus/Minus
Query 2763 TTTATGG---CTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCT 2819
||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 5033 TTTATGGGAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCC 4974
Query 2820 GGTTCAACCCCGGGCTTCAGC 2840
||||||| |||||| ||| ||
Sbjct 4973 GGTTCAATCCCGGGTTTCGGC 4953
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 3991 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 4050
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 4051 CCGGGTTTCGGC 4062
>seq1861
Length=286618
Score = 100 bits (110), Expect = 9e-18
Identities = 69/77 (90%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 2765 TATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823
|||| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 133288 TATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTT 133347
Query 2824 CAACCCCGGGCTTCAGC 2840
||| |||||| ||| ||
Sbjct 133348 CAATCCCGGGTTTCGGC 133364
>SEQ24109
Length=767471
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 32313 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 32372
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 32373 CCGGGTTTCGGC 32384
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 35696 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 35637
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 35636 CCGGGTTTCGGC 35625
>SEQ23920
Length=108908
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 76296 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 76355
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 76356 CCGGGTTTCGGC 76367
>SEQ20262
Length=111328
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 102855 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 102914
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 102915 CCGGGTTTCGGC 102926
>SEQ18693
Length=13269
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 5543 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 5484
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5483 CCGGGTTTCGGC 5472
>SEQ18692
Length=86564
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 82932 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 82873
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 82872 CCGGGTTTCGGC 82861
>seq7357
Length=6887
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 4257 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 4316
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 4317 CCGGGTTTCGGC 4328
>seq4304
Length=76544
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 16071 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 16130
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 16131 CCGGGTTTCGGC 16142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15845241508590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |