Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 98.7 8e-16 >SEQ18352 Length=541547 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || ||||||||||| ||||| || |||| || || Sbjct 390525 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 390584 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | |||||| || ||| ||||||||||| | || |||||| Sbjct 390585 GACACTATTGAAAATGTGAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 390644 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | | || | ||| ||||||||| | |||||| | ||| | |||||||||| Sbjct 390645 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 390704 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| |||||||| ||||||| |||||| | |||| || || Sbjct 390705 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 390751 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || ||||||||||| ||||| || |||| || || Sbjct 389385 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 389444 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| || ||| ||||||||||| | || |||||| Sbjct 389445 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 389504 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| ||||||||| | |||||| | ||| | |||||||||| Sbjct 389505 CAACGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 389564 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| |||||||| ||||||| |||||| | |||| || || Sbjct 389565 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 389611 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| ||||||||||| |||||||| ||||| ||| | Sbjct 401974 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACCATTACATTGGAAGTCGAAGCATCT 402033 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || |||||| || ||||||||| | || || ||| Sbjct 402034 GACACGATTGAGAACGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCTCCAGACCAA 402093 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| || || |||||||| |||||| | || | || |||||| Sbjct 402094 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCTGACTACAAC 402153 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 ||||| |||||||| ||||| ||||| ||||| Sbjct 402154 ATACAGAAAGAATCCACACTTCATTTGGTATT 402185 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || ||||||||||| |||||||| ||||| ||||| Sbjct 390297 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAAACCATTACATTGGAAGTTGAACCATCT 390356 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || || |||||| |||||||| ||| | ||| ||||| Sbjct 390357 GATACTATTGAAAATGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCCCCAGATCAG 390416 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | | |||| || || || || || |||||| | || | || |||||| Sbjct 390417 CAGCGTTTGATTTTCGCTGGTAAGCAGTTGGAAGATGGTCGTACCTTATCTGACTACAAC 390476 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 ||||| || ||||| ||||| ||||| ||||| Sbjct 390477 ATACAGAAGGAATCCACACTTCATTTGGTATT 390508 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| |||||||| || ||||| || ||||| |||| | Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | || ||| |||||| ||||||||||| | || |||||| Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| ||||||||| | |||||| | ||| | ||| |||||| Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || || |||||||| | ||||| || || Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGTGTT 399905 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||||||||| |||| |||||||||||||| | ||| ||||| Sbjct 401062 ATGCAGATATTTGTTAAAACCCTGACCGGCAAGACCATTACACTAGAAGTCGAACCATCT 401121 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || |||||| |||||||| ||| | || || ||| Sbjct 401122 GATAGTATTGAGAACGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGACCAA 401181 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||||| |||||| | || | ||||||||| Sbjct 401182 CAACGTTTGATATTTGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCCGATTACAAT 401241 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || || |||||||| | ||||| ||||| Sbjct 401242 ATTCAGAAGGAATCTACTTTGCATTTGGTATT 401273 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| || || ||||| ||||| || || ||| | || ||||| Sbjct 399922 ATGCAGATTTTTGTAAAGACTTTGACAGGCAAAACTATCACCTTAGAGGTCGAACCATCT 399981 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| ||| | || || |||||| |||||||| ||| | || |||||| Sbjct 399982 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400041 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||||| |||||| ||| | |||||||||| Sbjct 400042 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 400101 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || || ||||| ||||| ||||| ||||| Sbjct 400102 ATTCAGAAGGAATCCACACTTCATTTGGTATT 400133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402206318918336