Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 98.7 8e-16
>SEQ18352
Length=541547
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || || || || || ||||||||||| ||||| || |||| || ||
Sbjct 390525 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 390584
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | |||||| || ||| ||||||||||| | || ||||||
Sbjct 390585 GACACTATTGAAAATGTGAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 390644
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| | | || | ||| ||||||||| | |||||| | ||| | ||||||||||
Sbjct 390645 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 390704
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| ||||| |||||||| ||||||| |||||| | |||| || ||
Sbjct 390705 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 390751
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || || || || || ||||||||||| ||||| || |||| || ||
Sbjct 389385 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 389444
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | ||| | || ||| || ||| ||||||||||| | || ||||||
Sbjct 389445 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 389504
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | ||| ||||||||| | |||||| | ||| | ||||||||||
Sbjct 389505 CAACGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 389564
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| ||||| |||||||| ||||||| |||||| | |||| || ||
Sbjct 389565 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 389611
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||| ||||| ||||||||||| |||||||| ||||| ||| |
Sbjct 401974 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACCATTACATTGGAAGTCGAAGCATCT 402033
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | ||| | || || |||||| || ||||||||| | || || |||
Sbjct 402034 GACACGATTGAGAACGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCTCCAGACCAA 402093
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | |||| || || |||||||| |||||| | || | || ||||||
Sbjct 402094 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCTGACTACAAC 402153
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471
||||| |||||||| ||||| ||||| |||||
Sbjct 402154 ATACAGAAAGAATCCACACTTCATTTGGTATT 402185
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct 390297 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAAACCATTACATTGGAAGTTGAACCATCT 390356
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| || ||| | || || |||||| |||||||| ||| | ||| |||||
Sbjct 390357 GATACTATTGAAAATGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCCCCAGATCAG 390416
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| | | |||| || || || || || |||||| | || | || ||||||
Sbjct 390417 CAGCGTTTGATTTTCGCTGGTAAGCAGTTGGAAGATGGTCGTACCTTATCTGACTACAAC 390476
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471
||||| || ||||| ||||| ||||| |||||
Sbjct 390477 ATACAGAAGGAATCCACACTTCATTTGGTATT 390508
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||| ||||| |||||||| || ||||| || ||||| |||| |
Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | | | | || ||| |||||| ||||||||||| | || ||||||
Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | || || | ||| ||||||||| | |||||| | ||| | ||| ||||||
Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471
|| || || |||||||| | ||||| || ||
Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGTGTT 399905
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||||||||| |||| |||||||||||||| | ||| |||||
Sbjct 401062 ATGCAGATATTTGTTAAAACCCTGACCGGCAAGACCATTACACTAGAAGTCGAACCATCT 401121
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| | ||| | || || |||||| |||||||| ||| | || || |||
Sbjct 401122 GATAGTATTGAGAACGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGACCAA 401181
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | ||| || |||||||| |||||| | || | |||||||||
Sbjct 401182 CAACGTTTGATATTTGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCCGATTACAAT 401241
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471
|| || || |||||||| | ||||| |||||
Sbjct 401242 ATTCAGAAGGAATCTACTTTGCATTTGGTATT 401273
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| |||||||| || || ||||| ||||| || || ||| | || |||||
Sbjct 399922 ATGCAGATTTTTGTAAAGACTTTGACAGGCAAAACTATCACCTTAGAGGTCGAACCATCT 399981
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| ||| | || || |||||| |||||||| ||| | || ||||||
Sbjct 399982 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400041
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | ||| || |||||||| |||||| ||| | ||||||||||
Sbjct 400042 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 400101
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471
|| || || ||||| ||||| ||||| |||||
Sbjct 400102 ATTCAGAAGGAATCCACACTTCATTTGGTATT 400133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402206318918336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |