Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19926 215 4e-51
SEQ18161 152 4e-32
SEQ23413 111 1e-19
SEQ14824 111 1e-19
SEQ11801 100 2e-16
>SEQ19926
Length=251428
Score = 215 bits (238), Expect = 4e-51
Identities = 498/744 (67%), Gaps = 10/744 (1%)
Strand=Plus/Plus
Query 40681 TGAGAAATCAGTTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAG 40740
||||||| ||||||| | | || || ||| | |||||| | ||| ||| |
Sbjct 63715 TGAGAAAAGGGTTTCCGCTATTGACAACTAAACGTGTTTTTTGGCGTGCTGTTGTAGAGG 63774
Query 40741 AACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGA-AAGAGGAGTG 40799
| || | |||||||| ||||| | || |||| || ||| ||| |||| | |
Sbjct 63775 AGTTGCTGTGGTTTATAAAAGGATCAACAGATGCGCAGCTATTGCAAGATAAGAATA-TA 63833
Query 40800 CACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGG 40859
|| |||||| ||| | | ||||| ||| ||| || | || ||||| || |
Sbjct 63834 CATATTTGGGATGGGAATAGTTCCCGTGCATTTTTAGATAAACTTGGTTTACACGAACGT 63893
Query 40860 GATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATAT 40919
|| ||||| ||| | || || |||||||| ||||| | ||| ||||| || ||| |||||
Sbjct 63894 GAAGAAGGCGATTTAGGACCAGTTTATGGCTTTCAATGGCGTCATTTCGGTGCAGAATAT 63953
Query 40920 GACACTATGTACTC-TGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGA 40978
| | || || |||||| | |||| |||| || |||||| | | |||||| ||
Sbjct 63954 AAGGATC-GTCATCATGATTACAGCAATGAAGGTATTGATCAACTTAAAAACGTTATTGA 64012
Query 40979 TACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGA 41038
||| || | |||| || || | || ||| ||| || ||||| ||| ||
Sbjct 64013 TACTATACGTACAAATCCAAATGATAGAAGGATTATAATGTCTGCATGGAATCCATGTGA 64072
Query 41039 CGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGG 41098
||| | |||||| | ||||| || |||| ||| |||||||| ||| || |
Sbjct 64073 TATACCTAAAATGGCACTACCACCATGCCATTGTTTAGCTCAGTTTTTCGTAGCTAACGA 64132
Query 41099 TGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAA 41158
||| | || |||||| | ||||| | | ||| ||||| || || || || |||||
Sbjct 64133 TGAGTTATCTTGTCAACTATATCAGCGCAGTGCTGATATGGGTCTTGGTGTTCCATTTAA 64192
Query 41159 CATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGG 41218
|| || ||||||| | || ||| |||||||||| || ||||| ||||| |||||
Sbjct 64193 TATTGCCTCTTATGCTTTACTTACGCATATGATTGCGCATGTTACGGGATTAAAGCCTGG 64252
Query 41219 TGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAAC 41278
| ||||| ||||| | || ||| ||| | || | ||||| | || || ||||
Sbjct 64253 TTGTTTTGTACACACTATGGGTGATACGCATGTATATAAGAATCATGTCGAACCTTTAAA 64312
Query 41279 AGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGA 41338
|| ||||| | ||| | || ||| | ||||||| | ||||| ||||| | || |
Sbjct 64313 GGAGCAACTTAAACGTATTCCAAGAGCTTTTCCAAAATTGCTTATAAAACGTGAAGTAAA 64372
Query 41339 AAACATTGATGATTTTTGCATCGATGATTTTG---TCGTTTGCGATTACAATCCGTACCC 41395
|| ||||| |||||| | | |||||||||| | || || || ||||| || ||
Sbjct 64373 AAGTATTGAAGATTTTACCTTTGATGATTTTGAAATAATTGGCTAT---AATCCATATCC 64429
Query 41396 TAAAATCCACATGGACATGTCTGT 41419
||||||||| ||||| ||| ||||
Sbjct 64430 TAAAATCCAAATGGAGATGGCTGT 64453
>SEQ18161
Length=539859
Score = 152 bits (168), Expect = 4e-32
Identities = 280/406 (69%), Gaps = 17/406 (4%)
Strand=Plus/Plus
Query 19535 GGCGCAAA-AGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAA 19593
||| |||| ||| | | |||||||| ||| | |||||| | || || || ||||| |
Sbjct 231936 GGCCCAAATAGTGGTCTTCACATTATTATATTTGATGAAATTGATGCTATTTGTAAAGCA 231995
Query 19594 AGAGGTTCTGGTGTA------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCA 19647
| ||||||| || | |||||| ||||| || |||||||||||| | ||| |
Sbjct 231996 CGTGGTTCTGTTGCTGGCAACAGTGGAGTGCATGATACCGTTGTCAATCAATTGCTGGCT 232055
Query 19648 AAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTG 19707
|| | || ||||| | ||||| |||||||| |||| ||||| ||||| ||| | |
Sbjct 232056 AAGATTGATGGTGTGGAACAACTCAATAATATACTAGTCATTGGTATGACCAATCGTCGT 232115
Query 19708 GAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAAC 19767
|| | || || || | ||||| || ||||| |||||| | | || || || | |
Sbjct 232116 GATATGATTGATGAGGCTCTTTTACGTCCAGGTCGTTTGGAAGTTCAAATGGAGATAAGC 232175
Query 19768 TTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACC--ATGCGAC 19825
||||| ||||| |||||||| ||||||| || |||||||| ||| | ||||||
Sbjct 232176 TTACCAAATGAACAGGGACGTGTACAAATTTTGAATATACATAC--CAAACGTATGCGAG 232233
Query 19826 AA---AATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAA 19882
|| ||||| || || ||||| ||| |||||||||| | ||||||||
Sbjct 232234 AATTTAATAAGATT---GCTGGGGATGTTGATAGTAAAGAAATTGCTACACTTACCAAAA 232290
Query 19883 ACTATAGCGGCGCAGAACTTGAGGGATTAGTGAGGGCCGCCCAATC 19928
| | ||| || || ||| | || || ||||| | || || |||||
Sbjct 232291 ATTTTAGTGGTGCTGAAATAGAAGGTTTAGTACGTGCAGCACAATC 232336
>SEQ23413
Length=15718
Score = 111 bits (122), Expect = 1e-19
Identities = 175/248 (71%), Gaps = 7/248 (3%)
Strand=Plus/Minus
Query 44039 TTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAA 44098
||||||||||| || || || | || ||| | || | ||| || || ||||| ||
Sbjct 1034 TTGTTTAATGCTATTGAGACCATGCCAGCGGTAAAGCGTAAGGCTGAATGGGCACTATCT 975
Query 44099 TGGATAAATTC---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAA 44155
||||| ||| || || ||||| ||||| | | || ||||| | ||| |||
Sbjct 974 TGGATTTCTTCTAAAAGTGCAAACTTTGGTGAACGTATCATTGCTTTTGCTGCTGTTGAA 915
Query 44156 GGCATTTTCTTTTCA--GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213
|| || | |||||| ||| ||||| || || || ||||||||| |||| || |
Sbjct 914 GGTATAT--TTTTCAGTGGAAGTTTTGCTGCTATTTTCTGGTTAAAGCAACGTGGCATCT 857
Query 44214 TGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATT 44273
||||||| || || ||||| ||||| ||||| ||||||||| || |||||||| || |
Sbjct 856 TGCCTGGTTTAACATTTTCTAATGAATTAATTTCTCGTGATGAGGGATTACATTGTGACT 797
Query 44274 TTGCTTGC 44281
|||| |||
Sbjct 796 TTGCATGC 789
>SEQ14824
Length=19491
Score = 111 bits (122), Expect = 1e-19
Identities = 175/248 (71%), Gaps = 7/248 (3%)
Strand=Plus/Minus
Query 44039 TTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAA 44098
||||||||||| || || || | || ||| | || | ||| || || ||||| ||
Sbjct 5370 TTGTTTAATGCTATTGAGACCATGCCAGCGGTAAAGCGTAAGGCTGAATGGGCACTATCT 5311
Query 44099 TGGATAAATTC---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAA 44155
||||| ||| || || ||||| ||||| | | || ||||| | ||| |||
Sbjct 5310 TGGATTTCTTCTAAAAGTGCAAACTTTGGTGAACGTATCATTGCTTTTGCTGCTGTTGAA 5251
Query 44156 GGCATTTTCTTTTCA--GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213
|| || | |||||| ||| ||||| || || || ||||||||| |||| || |
Sbjct 5250 GGTATAT--TTTTCAGTGGAAGTTTTGCTGCTATTTTCTGGTTAAAGCAACGTGGCATCT 5193
Query 44214 TGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATT 44273
||||||| || || ||||| ||||| ||||| ||||||||| || |||||||| || |
Sbjct 5192 TGCCTGGTTTAACATTTTCTAATGAATTAATTTCTCGTGATGAGGGATTACATTGTGACT 5133
Query 44274 TTGCTTGC 44281
|||| |||
Sbjct 5132 TTGCATGC 5125
Score = 111 bits (122), Expect = 1e-19
Identities = 175/248 (71%), Gaps = 7/248 (3%)
Strand=Plus/Minus
Query 44039 TTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAA 44098
||||||||||| || || || | || ||| | || | ||| || || ||||| ||
Sbjct 12169 TTGTTTAATGCTATTGAGACCATGCCAGCGGTAAAGCGTAAGGCTGAATGGGCACTATCT 12110
Query 44099 TGGATAAATTC---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAA 44155
||||| ||| || || ||||| ||||| | | || ||||| | ||| |||
Sbjct 12109 TGGATTTCTTCTAAAAGTGCAAACTTTGGTGAACGTATCATTGCTTTTGCTGCTGTTGAA 12050
Query 44156 GGCATTTTCTTTTCA--GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213
|| || | |||||| ||| ||||| || || || ||||||||| |||| || |
Sbjct 12049 GGTATAT--TTTTCAGTGGAAGTTTTGCTGCTATTTTCTGGTTAAAGCAACGTGGCATCT 11992
Query 44214 TGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATT 44273
||||||| || || ||||| ||||| ||||| ||||||||| || |||||||| || |
Sbjct 11991 TGCCTGGTTTAACATTTTCTAATGAATTAATTTCTCGTGATGAGGGATTACATTGTGACT 11932
Query 44274 TTGCTTGC 44281
|||| |||
Sbjct 11931 TTGCATGC 11924
>SEQ11801
Length=23874
Score = 100 bits (110), Expect = 2e-16
Identities = 289/435 (66%), Gaps = 26/435 (6%)
Strand=Plus/Plus
Query 44036 CGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTT 44095
|| ||||||||||| || || || | || || | || | ||| || || ||||| ||
Sbjct 20064 CGCTTGTTTAATGCTATTGAGACCATGCCAGCAGTAAAGCGTAAGGCTGAATGGGCACTA 20123
Query 44096 AAATGGATAAATTC---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTG 44152
||||| ||| || || ||||| ||||| | | || ||||| | ||
Sbjct 20124 GCTTGGATTTCTTCTAAAAGTGCGAACTTTGGTGAACGTATCATTGCTTTTGCTGCGGTT 20183
Query 44153 GAAGGCATTTTCTTTTCA--GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210
||||| || | |||||| ||| ||||| || || || ||||||||| |||| ||
Sbjct 20184 GAAGGTATAT--TTTTCAGTGGAAGTTTTGCTGCTATTTTCTGGTTAAAGCAACGTGGCA 20241
Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270
| ||| ||| || || ||||| ||||| ||||| ||||||||| || |||||||| |
Sbjct 20242 TCTTGCATGGTTTAACATTTTCTAATGAATTAATTTCTCGTGATGAGGGATTACATTGTG 20301
Query 44271 ATTTTGCTTGCTTGTTACTTGGATATCTAGGAG--ACGATAAGCCTTCATGTAAG--AC- 44325
| ||||| ||| | | || | | || || | ||| || ||| |||| ||
Sbjct 20302 ACTTTGCATGCCTTATGTTTCAACA-CTTGGTGCAACG----GC---CATCTAAGCAACG 20353
Query 44326 AATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATT 44385
|||| || ||| | ||| || || || || ||| |||| || | || ||| ||
Sbjct 20354 TATTATTGAAATTATAACAGATGCTGTTAAAATTGAAAAAGAGTTCCTAACTGTAGCTTT 20413
Query 44386 ACCTGTAAATTTAATAGGAATGAAT---GAACTTTTGATGAACCAATATATTGAATACAT 44442
|||| ||| | | || |||||| ||||| ||| ||||||||| |||| |
Sbjct 20414 GTCTGTTAATCTCCTTGGTATGAATTGCAAACTT---ATGTCCCAATATATAGAATTTGT 20470
Query 44443 TGCAGATCGTTTACT 44457
||| |||||||| ||
Sbjct 20471 TGCCGATCGTTTGCT 20485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397334212277710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |