Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8547 84.2 3e-11 >seq8547 Length=35786 Score = 84.2 bits (92), Expect = 3e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 181823 ACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAGTC 181882 ||| |||||||||||||||| || ||||| | ||||| ||||| || || | ||| Sbjct 8550 ACGTGTACCAAATTGACCACGAGGTTCAAGCAAATTAATATTGTTGGATCCAACAAAGTT 8609 Query 181883 GTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGACT 181941 | ||||| || || || || || | || | | |||||||| ||||| || |||||| Sbjct 8610 TTGAGCCAAATTTACAATTGTCATTTGTAATG-ATACTTCACCATGGTGATATGCTGACA 8668 Query 181942 TGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTGAGGTTCTTGTGGA 182001 | || || || | | | || ||||| || || | ||| | || ||| | | Sbjct 8669 TTTCAGCTACGGAACCAGATAATTGTGCTACTTTAACTTCCTTCTTATCGTTACGTTTAA 8728 Query 182002 AGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATCCGCCATA 182051 | || | | |||| ||||||||||| |||||| | |||||| ||||| Sbjct 8729 AACATGTAAACATAACTTTCCTCTGACCAGGCTTAAAACCATCTACCATA 8778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627834625243200