Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 95.1 1e-14 >SEQ18352 Length=541547 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 ||||| || | | ||| |||| |||||||| ||||| || |||||||||||||||| Sbjct 401288 CCGCCACGTAGACGTAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGG-- 401231 Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 | || | || ||||||||||||||| || ||| |||| | | |||||||||| | Sbjct 401230 AGAGGGTGCGACCATCTTCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAG 401171 Query 101130 GCACGCCTTCTTTGTCGGCAATTTT 101154 | | ||| |||||||| |||||| Sbjct 401170 GAATGCCCTCTTTGTCTTGAATTTT 401146 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 |||||||| |||||||| ||||| || ||||| ||||| |||| | ||| ||| Sbjct 399906 TAACACCAAATGCAAAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATC 399847 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| | ||||||||| ||| | || || | |||||| ||| || | ||||||||||| Sbjct 399846 TTCAAGTTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTC 399787 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | || | ||| | || || || Sbjct 399786 TTGAATTTTAGATTTTACATTTTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGT 399727 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| || ||||| ||||| | ||| || ||||| Sbjct 399726 TTTTCCAGTCAAAGTTTTGACAAATATCTGCAT 399694 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 ||||| || | | ||| |||| |||||||| ||||| ||||||||||| ||||||| Sbjct 401060 CCGCCACGTAGACGTAATACCAAATGCAAAGTAGATTCCTTTTGAATATTATAATCGGAG 401001 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| ||||||||||||||| || ||| |||| | | |||||| ||| || Sbjct 401000 AGAGTACGTCCATCTTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGA 400941 Query 101132 ACGCCTTCTTTGTCGGCAATTTT 101154 | ||| |||||||| |||||| Sbjct 400940 ATGCCCTCTTTGTCTTGAATTTT 400918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409535272505778