Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 114 3e-20 >SEQ18352 Length=541547 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||||||||| |||||||||||||| || | ||| || | |||||||| | Sbjct 389819 CAAG-TGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGATAAGGTACGACCATCTTCAA 389761 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||| || | | ||| || || | | || ||||| || ||||| | Sbjct 389760 GCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGA 389701 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | |||| || ||| || || | |||||| ||||||| Sbjct 389700 TCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATGGTTTTGC 389641 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| ||||| Sbjct 389640 CAGTCAAAGTCTTGACGAAGATTTGCAT 389613 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||||||||| |||||||||||||| || | ||| || | |||||||| | Sbjct 391187 CAAG-TGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGATAAGGTACGACCATCTTCAA 391129 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||| || | | ||| || || | | || ||||| || ||||| | Sbjct 391128 GCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGA 391069 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | |||| || ||| || || | |||||| ||||||| Sbjct 391068 TCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATGGTTTTGC 391009 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| ||||| Sbjct 391008 CAGTCAAAGTCTTGACGAAGATTTGCAT 390981 Score = 111 bits (122), Expect = 4e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | |||||| || ||||||||||||||||||| | ||| | |||||||| || Sbjct 389588 ATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCTTCAAGTTG 389529 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | || || || | | || ||||| || |||||||| || Sbjct 389528 TTTGCCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATCTT 389469 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||||| | || | | |||| || ||| || || | ||| || |||||||| || Sbjct 389468 AGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACCTCCAAAGTGATGGTTTTGCCAGT 389409 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||||| |||||| Sbjct 389408 CAAGGTCTTTACGAAGATCTGCAT 389385 Score = 111 bits (122), Expect = 4e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | |||||| || |||||||||||||| |||| ||||| | |||||||| || Sbjct 390956 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTACGACCATCTTCAAGTTG 390897 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | ||| || || | | || ||||| || ||||| ||||| Sbjct 390896 TTTGCCAGCAAAGATTAAACGCTGTTGATCTGGGGGAATGCCTTCTTTATCTTGGATTTT 390837 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || ||| | || | | |||| || ||| || || | |||||| |||||||| || Sbjct 390836 AGCCTTAACATTTTCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATGGTTTTGCCAGT 390777 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | |||||| ||||||| ||||| Sbjct 390776 CAAAGTCTTGACGAAGATTTGCAT 390753 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | |||||| || ||||||||||||||||||| | ||| | |||||||| || Sbjct 390728 ATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCTTCAAGTTG 390669 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | ||| || || | | || ||||| || |||||||| || Sbjct 390668 TTTGCCAGCAAAGATTAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATCTT 390609 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | |||| || ||| || || | ||| || |||||||| || Sbjct 390608 AGCTTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCCAAAGTGATGGTTTTGCCAGT 390549 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||||| |||||| Sbjct 390548 CAAGGTCTTTACGAAGATCTGCAT 390525 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| ||||| ||||||||||| |||| ||||| | |||||||| | Sbjct 390047 CAAG-TGGAGAGTAGATTCTTTCTGGATGTTGTAGTCGGACAAAGTACGACCATCTTCAA 389989 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||| || | | |||||| || | | || ||||| || ||||| | Sbjct 389988 GCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGGA 389929 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| | || | | || || || || || | |||||| ||||||| Sbjct 389928 TTTTAGCCTTAACATTTTCAATTGTATCAGATGGTTCAACCTCCAAAGTAATGGTTTTGC 389869 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||||| |||||| Sbjct 389868 CAGTCAAGGTCTTTACGAAGATCTGCAT 389841 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | |||||| || || || |||||||| |||| | ||| | |||||||| || Sbjct 399897 ATGCAAAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTCAAGTTG 399838 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| || | || || || | || || ||||| || ||||||||||| Sbjct 399837 TTTGCCAGCAAAGATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCTTGAATTTT 399778 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | |||| |||| ||| |||||||| | ||| || ||||| || || Sbjct 399777 AGATTTTACATTTTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTTTCCAGT 399718 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | ||| || || || | |||||| Sbjct 399717 CAAAGTTTTGACAAATATCTGCAT 399694 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || | ||| || |||||||| ||||| ||||| | | || | |||||| Sbjct 399449 AGGACCAAGTGTAAAGTGGATTCTTTTTGTATGTTATAATCAGAAAGGGTGCGACCATCT 399390 Query 151953 TCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || || || |||| | || || || | | || ||||| || || Sbjct 399389 TCAAGTTGCTTACCAGCAAATATTAAGCGT-TGTTGATCTGGTGGAATGCCTTCTTTGTC 399331 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| || ||| | || | ||| || || || || || | ||| || || Sbjct 399330 CTGAATTTTTGCCTTAACATTTTCGATGCTATCAGATGGTTCCACCTCCAAAGTGATGGT 399271 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||| || | ||||||||||||| ||||||||| Sbjct 399270 TTTGCCTGTTAATGTCTTCACGAAGATCTGCATTTT 399235 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || |||||||||||||| || | ||| || | |||||||| | Sbjct 389363 CAAG-TGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGATAACGTGCGACCATCTTCCA 389305 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || ||||| || | | ||| ||||| | | || ||||| || ||||| | Sbjct 389304 ACTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCTTCTTTATCTTGGA 389245 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | || || || ||||| | ||||| ||||||| Sbjct 389244 TCTTAGCCTTGACGTTTTCAATTGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTGC 389185 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||| | ||||| Sbjct 389184 CAGTCAAAGTCTTGACGAAAATTTGCAT 389157 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 |||||| || || || || || |||||||| || | ||| || | |||||||| | Sbjct 390500 ATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCTTCCAACTG 390441 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || ||||| || | | |||||| || | | || || || || ||||||||||| Sbjct 390440 CTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGAATTTT 390381 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 |||||| | || | | || || || ||||| | ||||| |||||||| || Sbjct 390380 AGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTGCCAGT 390321 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || |||| |||||| Sbjct 390320 CAAAGTCTTGACAAAGATCTGCAT 390297 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 |||||| || || || || || ||||||||||||| | ||| | |||||||| | Sbjct 401949 ATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCTTCCAATTG 401890 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| ||||| || || | | || ||||| | | || || || || ||||||||||| Sbjct 401889 TTTACCGGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCTTGAATTTT 401830 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||| |||| | || || || || || || | || || |||||||| || Sbjct 401829 AGCCTTGACGTTCTCAATACTATCAGATGGTTCGACCTCTAAGGTGATCGTTTTGCCTGT 401770 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | |||||| ||||| | |||||| Sbjct 401769 TAAAGTCTTAACGAAAATCTGCAT 401746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153449117542282