Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value SEQ17304 84.2 6e-12 >SEQ17304 Length=5410 Score = 84.2 bits (92), Expect = 6e-12 Identities = 135/197 (69%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 31793 TTCTTAAAAGTGAACTCATCACCACATAACCTT---GCAATGCAAAAATCGCCTGGGTCT 31849 || ||||| |||||||||| ||| ||| ||| || |||||||| || || | || Sbjct 1748 TTTTTAAAGGTGAACTCATTTCCAT-TAATCTTTTTGCTATGCAAAAGTCTCCCGTATCA 1806 Query 31850 ACAGGAACTTNNNNNNNNNNNNNNATCAGCATTCCTTCAGGAAAGCTTGGTCGTGATCCC 31909 ||||| | | || | || ||||| || ||||||||| || ||| Sbjct 1807 ACAGGTTCATTAGGGTCAATTAATATTAAAATGCCTTCTGGGAAGCTTGGTTTTGTTCCT 1866 Query 31910 GCTGGAGCCGTCATTGAGTGGCCTTCAACTTCAAGCCAAAAAGATGAATCACTGGCTTTT 31969 |||||| ||||| ||||| ||||| ||||| | |||||| ||| ||||||||||| Sbjct 1867 TGTGGAGCTGTCATAGAGTGACCTTCTACTTCTAACCAAAAGGATCTGTCACTGGCTTTC 1926 Query 31970 TTGGTCGTACTAATCCA 31986 || | ||| |||||| Sbjct 1927 TTTGCTGTAGGAATCCA 1943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129257397224620