Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23413 192 6e-44
SEQ14824 188 7e-43
SEQ11801 132 5e-26
>SEQ23413
Length=15718
Score = 192 bits (212), Expect = 6e-44
Identities = 490/751 (65%), Gaps = 70/751 (9%)
Strand=Plus/Plus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||| || |||||||| ||||||||| |||| | | | || ||||| | || || ||
Sbjct 624 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 683
Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462
| | || || || ||| ||||||||| |||||||||| | || |||| ||
Sbjct 684 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 743
Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519
|||| || | ||| |||| || | ||| | ||||| | |||||||| ||
Sbjct 744 AATACGTTGCT---TAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTC 800
Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579
|||||||| || ||||| | | ||| |||||||||||||||||||| || |||| |
Sbjct 801 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGAT 860
Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639
|| |||| || | ||| || || |||||||| ||| || || ||||| |||||
Sbjct 861 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 920
Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699
||| ||||| || | | |||| |||||| ||||| | | | ||||||||| |
Sbjct 921 AGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAG 980
Query 23700 tGTCCAATTAGCCTTCAATTTTAC-----ACA----CTCAATTG--TT--TCAATTG--C 23744
|| ||| | |||||| ||||| || |||||| | || ||| || |
Sbjct 981 TGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTC 1040
Query 23745 TTTTAAGAGAAAAGTTT-----------------------------------------TT 23763
| |||| | |||| ||| ||
Sbjct 1041 TCTTAAAAAAAAATTTTATTTCACAATACATACAATACACTCCATAAATAAACATACCTT 1100
Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823
||||||| ||| | | ||| || ||||| | | ||||||||||| ||||| | ||||
Sbjct 1101 TCTTCATGATCCTTAACATAAGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTT 1160
Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883
||||| || || ||||| || || || ||||||||||||| | |||||| || |
Sbjct 1161 TCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTG 1220
Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943
|| | | ||||||| |||||||||||||||||| ||||||||||||||| | | |
Sbjct 1221 AAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATA 1280
Query 23944 TATTTTATAAAATGTCTTTCATCAGTTG--AT--AATTTTTTCCAATCATTAATATCTTT 23999
| || ||||||| | || |||| || ||||| | |||||||| | ||| ||
Sbjct 1281 TGCTTAATAAAATAACGCTC----GTTGTCATTCAATTTCTCCCAATCATCCAAATCCTT 1336
Query 24000 TGATAAATCAACTTCATCAACTGTCCAAAAA 24030
| | ||||| || || || |||||||
Sbjct 1337 AGCAAGGTCAACCTCTTCCACAACCCAAAAA 1367
>SEQ14824
Length=19491
Score = 188 bits (208), Expect = 7e-43
Identities = 488/750 (65%), Gaps = 68/750 (9%)
Strand=Plus/Plus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||| || |||||||| ||||||||| |||| | | | || ||||| | || || ||
Sbjct 4960 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 5019
Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462
| | || || || ||| ||||||||| |||||||||| | || |||| ||
Sbjct 5020 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 5079
Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519
|||| || | ||| |||| || | ||| | ||||| | |||||||| ||
Sbjct 5080 AATACGTTGCT---TAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTC 5136
Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579
|||||||| || ||||| | | ||| |||||||||||||||||||| || |||| |
Sbjct 5137 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGAT 5196
Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639
|| |||| || | ||| || || |||||||| ||| || || ||||| |||||
Sbjct 5197 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 5256
Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699
||| ||||| || | | |||| |||||| ||||| | | | ||||||||| |
Sbjct 5257 AGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAG 5316
Query 23700 tGTCCAATTAGCCTTCAATTTTAC-----ACA----CTCAATTG--TT--TCAATTG--C 23744
|| ||| | |||||| ||||| || |||||| | || ||| || |
Sbjct 5317 TGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTC 5376
Query 23745 TTTTAAGAGAAAAGTTT-----------------------------------------TT 23763
| |||| | |||| ||| ||
Sbjct 5377 TCTTAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTT 5436
Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823
||||||| ||| | | ||| || ||||| | | ||||||||||| ||||| | ||||
Sbjct 5437 TCTTCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTT 5496
Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883
||||| || || ||||| || || || ||||||||||||| | |||||| || |
Sbjct 5497 TCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTG 5556
Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943
|| | | ||||||| |||||||||||||||||| ||||||||||||||| | | |
Sbjct 5557 AAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATA 5616
Query 23944 TATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000
| || ||||| | | || ||| | |||||| | |||||||| | ||| ||
Sbjct 5617 TGCTTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTA 5673
Query 24001 GATAAATCAACTTCATCAACTGTCCAAAAA 24030
| | ||||| || || || |||||||
Sbjct 5674 GCAAGGTCAACCTCTTCCACAACCCAAAAA 5703
Score = 188 bits (208), Expect = 7e-43
Identities = 488/750 (65%), Gaps = 68/750 (9%)
Strand=Plus/Plus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||| || |||||||| ||||||||| |||| | | | || ||||| | || || ||
Sbjct 11759 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 11818
Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462
| | || || || ||| ||||||||| |||||||||| | || |||| ||
Sbjct 11819 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 11878
Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519
|||| || | ||| |||| || | ||| | ||||| | |||||||| ||
Sbjct 11879 AATACGTTGCT---TAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTC 11935
Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579
|||||||| || ||||| | | ||| |||||||||||||||||||| || |||| |
Sbjct 11936 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGAT 11995
Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639
|| |||| || | ||| || || |||||||| ||| || || ||||| |||||
Sbjct 11996 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 12055
Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699
||| ||||| || | | |||| |||||| ||||| | | | ||||||||| |
Sbjct 12056 AGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAG 12115
Query 23700 tGTCCAATTAGCCTTCAATTTTAC-----ACA----CTCAATTG--TT--TCAATTG--C 23744
|| ||| | |||||| ||||| || |||||| | || ||| || |
Sbjct 12116 TGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTC 12175
Query 23745 TTTTAAGAGAAAAGTTT-----------------------------------------TT 23763
| |||| | |||| ||| ||
Sbjct 12176 TCTTAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTT 12235
Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823
||||||| ||| | | ||| || ||||| | | ||||||||||| ||||| | ||||
Sbjct 12236 TCTTCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTT 12295
Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883
||||| || || ||||| || || || ||||||||||||| | |||||| || |
Sbjct 12296 TCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTG 12355
Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943
|| | | ||||||| |||||||||||||||||| ||||||||||||||| | | |
Sbjct 12356 AAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATA 12415
Query 23944 TATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000
| || ||||| | | || ||| | |||||| | |||||||| | ||| ||
Sbjct 12416 TGCTTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTA 12472
Query 24001 GATAAATCAACTTCATCAACTGTCCAAAAA 24030
| | ||||| || || || |||||||
Sbjct 12473 GCAAGGTCAACCTCTTCCACAACCCAAAAA 12502
>SEQ11801
Length=23874
Score = 132 bits (146), Expect = 5e-26
Identities = 138/180 (77%), Gaps = 1/180 (1%)
Strand=Plus/Minus
Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821
|||| |||| ||| | ||||| || ||||| | | ||||||||||| ||||| | |
Sbjct 20003 TTTCGTCATAATCCTTAATATAGGTGTCAATCAAGATGCTATACATTTCGGAATGGACGT 19944
Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAA 23881
| || |||||||| ||||| || || || ||||||||||||| | |||||| || ||
Sbjct 19943 TCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCAGCAACTTGAACTTCTTTGC 19884
Query 23882 AAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGC-AAGA 23940
|| | | ||||||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct 19883 TGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGA 19824
Score = 123 bits (136), Expect = 3e-23
Identities = 253/375 (67%), Gaps = 6/375 (2%)
Strand=Plus/Minus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||| || |||||||| |||||||| |||| | | | || ||||| | || || ||
Sbjct 20477 ATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAGGAGATTAAC 20418
Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462
| | || || || ||| ||||||||| |||||||||| | || |||| ||
Sbjct 20417 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 20358
Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519
|||| || | ||| ||| || | | | | ||||| | |||||||| ||
Sbjct 20357 AATACGTTGCT---TAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATGCAAAGTC 20301
Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579
|||||||| || ||||| | | ||| |||||||||||||||||||| || ||| |
Sbjct 20300 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCATGCAAGAT 20241
Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639
|| |||| || | ||| || || |||||||| ||| || || ||||| |||||
Sbjct 20240 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 20181
Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699
|| ||||| || | | |||| |||||| | ||| | | | ||||||||| |
Sbjct 20180 CGCAGCAAAAGCAATGATACGTTCACCAAAGTTCGCACTTTTAGAAGAAATCCAAGCTAG 20121
Query 23700 tGTCCAATTAGCCTT 23714
|| ||| | ||||||
Sbjct 20120 TGCCCATTCAGCCTT 20106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521324109358800
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