Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value SEQ23413 192 6e-44 SEQ14824 188 7e-43 SEQ11801 132 5e-26 >SEQ23413 Length=15718 Score = 192 bits (212), Expect = 6e-44 Identities = 490/751 (65%), Gaps = 70/751 (9%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||||||| |||| | | | || ||||| | || || || Sbjct 624 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 683 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 | | || || || ||| ||||||||| |||||||||| | || |||| || Sbjct 684 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 743 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519 |||| || | ||| |||| || | ||| | ||||| | |||||||| || Sbjct 744 AATACGTTGCT---TAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTC 800 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 |||||||| || ||||| | | ||| |||||||||||||||||||| || |||| | Sbjct 801 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGAT 860 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 || |||| || | ||| || || |||||||| ||| || || ||||| ||||| Sbjct 861 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 920 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 ||| ||||| || | | |||| |||||| ||||| | | | ||||||||| | Sbjct 921 AGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAG 980 Query 23700 tGTCCAATTAGCCTTCAATTTTAC-----ACA----CTCAATTG--TT--TCAATTG--C 23744 || ||| | |||||| ||||| || |||||| | || ||| || | Sbjct 981 TGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTC 1040 Query 23745 TTTTAAGAGAAAAGTTT-----------------------------------------TT 23763 | |||| | |||| ||| || Sbjct 1041 TCTTAAAAAAAAATTTTATTTCACAATACATACAATACACTCCATAAATAAACATACCTT 1100 Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823 ||||||| ||| | | ||| || ||||| | | ||||||||||| ||||| | |||| Sbjct 1101 TCTTCATGATCCTTAACATAAGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTT 1160 Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883 ||||| || || ||||| || || || ||||||||||||| | |||||| || | Sbjct 1161 TCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTG 1220 Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943 || | | ||||||| |||||||||||||||||| ||||||||||||||| | | | Sbjct 1221 AAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATA 1280 Query 23944 TATTTTATAAAATGTCTTTCATCAGTTG--AT--AATTTTTTCCAATCATTAATATCTTT 23999 | || ||||||| | || |||| || ||||| | |||||||| | ||| || Sbjct 1281 TGCTTAATAAAATAACGCTC----GTTGTCATTCAATTTCTCCCAATCATCCAAATCCTT 1336 Query 24000 TGATAAATCAACTTCATCAACTGTCCAAAAA 24030 | | ||||| || || || ||||||| Sbjct 1337 AGCAAGGTCAACCTCTTCCACAACCCAAAAA 1367 >SEQ14824 Length=19491 Score = 188 bits (208), Expect = 7e-43 Identities = 488/750 (65%), Gaps = 68/750 (9%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||||||| |||| | | | || ||||| | || || || Sbjct 4960 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 5019 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 | | || || || ||| ||||||||| |||||||||| | || |||| || Sbjct 5020 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 5079 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519 |||| || | ||| |||| || | ||| | ||||| | |||||||| || Sbjct 5080 AATACGTTGCT---TAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTC 5136 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 |||||||| || ||||| | | ||| |||||||||||||||||||| || |||| | Sbjct 5137 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGAT 5196 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 || |||| || | ||| || || |||||||| ||| || || ||||| ||||| Sbjct 5197 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 5256 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 ||| ||||| || | | |||| |||||| ||||| | | | ||||||||| | Sbjct 5257 AGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAG 5316 Query 23700 tGTCCAATTAGCCTTCAATTTTAC-----ACA----CTCAATTG--TT--TCAATTG--C 23744 || ||| | |||||| ||||| || |||||| | || ||| || | Sbjct 5317 TGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTC 5376 Query 23745 TTTTAAGAGAAAAGTTT-----------------------------------------TT 23763 | |||| | |||| ||| || Sbjct 5377 TCTTAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTT 5436 Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823 ||||||| ||| | | ||| || ||||| | | ||||||||||| ||||| | |||| Sbjct 5437 TCTTCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTT 5496 Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883 ||||| || || ||||| || || || ||||||||||||| | |||||| || | Sbjct 5497 TCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTG 5556 Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943 || | | ||||||| |||||||||||||||||| ||||||||||||||| | | | Sbjct 5557 AAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATA 5616 Query 23944 TATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000 | || ||||| | | || ||| | |||||| | |||||||| | ||| || Sbjct 5617 TGCTTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTA 5673 Query 24001 GATAAATCAACTTCATCAACTGTCCAAAAA 24030 | | ||||| || || || ||||||| Sbjct 5674 GCAAGGTCAACCTCTTCCACAACCCAAAAA 5703 Score = 188 bits (208), Expect = 7e-43 Identities = 488/750 (65%), Gaps = 68/750 (9%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||||||| |||| | | | || ||||| | || || || Sbjct 11759 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 11818 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 | | || || || ||| ||||||||| |||||||||| | || |||| || Sbjct 11819 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 11878 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519 |||| || | ||| |||| || | ||| | ||||| | |||||||| || Sbjct 11879 AATACGTTGCT---TAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTC 11935 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 |||||||| || ||||| | | ||| |||||||||||||||||||| || |||| | Sbjct 11936 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGAT 11995 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 || |||| || | ||| || || |||||||| ||| || || ||||| ||||| Sbjct 11996 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 12055 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 ||| ||||| || | | |||| |||||| ||||| | | | ||||||||| | Sbjct 12056 AGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAG 12115 Query 23700 tGTCCAATTAGCCTTCAATTTTAC-----ACA----CTCAATTG--TT--TCAATTG--C 23744 || ||| | |||||| ||||| || |||||| | || ||| || | Sbjct 12116 TGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTC 12175 Query 23745 TTTTAAGAGAAAAGTTT-----------------------------------------TT 23763 | |||| | |||| ||| || Sbjct 12176 TCTTAAAAAAAAATTTTATTTCACAATACATACAATACATTCCATTAATAAACATACCTT 12235 Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823 ||||||| ||| | | ||| || ||||| | | ||||||||||| ||||| | |||| Sbjct 12236 TCTTCATGATCCTTAACATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTT 12295 Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883 ||||| || || ||||| || || || ||||||||||||| | |||||| || | Sbjct 12296 TCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTG 12355 Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943 || | | ||||||| |||||||||||||||||| ||||||||||||||| | | | Sbjct 12356 AAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATA 12415 Query 23944 TATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000 | || ||||| | | || ||| | |||||| | |||||||| | ||| || Sbjct 12416 TGCTTAATAAAGTAACGCTCGTTGTCATT---TAATTTCTCCCAATCATCCAAATCCTTA 12472 Query 24001 GATAAATCAACTTCATCAACTGTCCAAAAA 24030 | | ||||| || || || ||||||| Sbjct 12473 GCAAGGTCAACCTCTTCCACAACCCAAAAA 12502 >SEQ11801 Length=23874 Score = 132 bits (146), Expect = 5e-26 Identities = 138/180 (77%), Gaps = 1/180 (1%) Strand=Plus/Minus Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 |||| |||| ||| | ||||| || ||||| | | ||||||||||| ||||| | | Sbjct 20003 TTTCGTCATAATCCTTAATATAGGTGTCAATCAAGATGCTATACATTTCGGAATGGACGT 19944 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAA 23881 | || |||||||| ||||| || || || ||||||||||||| | |||||| || || Sbjct 19943 TCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCAGCAACTTGAACTTCTTTGC 19884 Query 23882 AAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGC-AAGA 23940 || | | ||||||| |||||||||||||||||| ||||||||||||||| |||| Sbjct 19883 TGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGA 19824 Score = 123 bits (136), Expect = 3e-23 Identities = 253/375 (67%), Gaps = 6/375 (2%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| |||||||| |||| | | | || ||||| | || || || Sbjct 20477 ATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAGGAGATTAAC 20418 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 | | || || || ||| ||||||||| |||||||||| | || |||| || Sbjct 20417 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 20358 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAATC 23519 |||| || | ||| ||| || | | | | ||||| | |||||||| || Sbjct 20357 AATACGTTGCT---TAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATGCAAAGTC 20301 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 |||||||| || ||||| | | ||| |||||||||||||||||||| || ||| | Sbjct 20300 ACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCATGCAAGAT 20241 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 || |||| || | ||| || || |||||||| ||| || || ||||| ||||| Sbjct 20240 GCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAAC 20181 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 || ||||| || | | |||| |||||| | ||| | | | ||||||||| | Sbjct 20180 CGCAGCAAAAGCAATGATACGTTCACCAAAGTTCGCACTTTTAGAAGAAATCCAAGCTAG 20121 Query 23700 tGTCCAATTAGCCTT 23714 || ||| | |||||| Sbjct 20120 TGCCCATTCAGCCTT 20106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521324109358800