Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 111 1e-19 >SEQ18352 Length=541547 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||||||||||| ||| || | || || || || || || |||||| Sbjct 390715 TCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAG 390656 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || |||||||| ||||||| ||| | |||||| || || ||||| |||| || Sbjct 390655 ATTAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATCTTAGCTTTCACATTT 390596 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||| | | || ||||||| || || || || || || | |||||| ||| Sbjct 390595 TCAATAGTGTCAGATGGCTCGACCTCCAAAGTGATGGTTTTGCCAGTCAAGGTCTTTACG 390536 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 390535 AAGATCTGCAT 390525 Score = 109 bits (120), Expect = 4e-19 Identities = 167/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | ||| |||| ||| || || |||||||| |||||||| Sbjct 389162 TTGCATACCACCACGTAGACGCAAGACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTA 389103 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| ||| ||| | || |||| ||||| || ||||| || ||||| || || || Sbjct 389102 GTCGGAGAGGGTACGCCCATCCTCCAATTGCTTACCAGCAAAAATTAAACGTTGTTGGTC 389043 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||||||||| ||| || || ||| | || | |||||||||| | Sbjct 389042 TGGTGGAATACCTTCCTTATCCTGAATTTTAGCCTTGACATTTTCAATGGTGTCGGATGG 388983 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || |||| ||||| || || || || | || ||||| |||||||||||| || Sbjct 388982 CTCGACTTCCAAAGTAATGGTTTTACCAGTCAAAGTTTTCACAAAGATTTGCATGTTG 388925 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||||||||||| ||| || | || || || || || || |||||| Sbjct 389575 TCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAG 389516 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || ||||| || ||||||| ||| | |||||| || || ||||| || | || Sbjct 389515 ATTAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATCTTAGCTTTGACATTT 389456 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | |||||||| | | || ||||||| || || || || || || | |||||| ||| Sbjct 389455 TCAATGGTGTCAGATGGCTCGACCTCCAAAGTGATGGTTTTGCCAGTCAAGGTCTTTACG 389396 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 389395 AAGATCTGCAT 389385 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| |||| ||| || || |||||||||||||||||| || Sbjct 389843 CATACCACCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTC 389784 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | || || |||||||| || || || ||||||||||| ||||||| Sbjct 389783 AGATAAGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGG 389724 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||| || || ||||| || | || | |||||||| | | || Sbjct 389723 AGGAATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTC 389664 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| || || || || | ||||| |||||||||||||| Sbjct 389663 GACCTCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 389613 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| |||| ||| || || |||||||||||||||||| || Sbjct 391211 CATACCACCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTC 391152 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | || || |||||||| || || || ||||||||||| ||||||| Sbjct 391151 AGATAAGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGG 391092 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||| || || ||||| || | || | |||||||| | | || Sbjct 391091 AGGAATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTC 391032 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| || || || || | ||||| |||||||||||||| Sbjct 391031 GACCTCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 390981 Score = 98.7 bits (108), Expect = 7e-16 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGT 44183 ||| |||| ||||| || ||||| || ||||| || || | | || || || | | Sbjct 391421 CAAGACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAGTCAGACAAGGTG-CGACCAT 391363 Query 44184 CGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTT 44243 | |||| |||||| || || || ||||||||||||||||||| || | || || || | Sbjct 391362 CTTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGT 391303 Query 44244 CCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 | ||||| |||| || || | |||||||| | | ||| ||||||| ||||| Sbjct 391302 CTTGGATCTT-AGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATG 391244 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||| |||||||| ||||| Sbjct 391243 GTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 391209 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| |||| ||| || || || || ||||||||||| || Sbjct 390071 CATACCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTC 390012 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | || | || || |||||||| || || || ||||||||||||||||||| Sbjct 390011 GGACAAAGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGG 389952 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || || || ||| | || | || || || | | ||| Sbjct 389951 TGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTAACATTTTCAATTGTATCAGATGGTTC 389892 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| ||||| || || || || | |||||| |||||||| ||||| Sbjct 389891 AACCTCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389841 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| |||| ||| || || ||||||||||||||||| || Sbjct 389387 CATACCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTC 389328 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | ||| | || |||| |||||| || || || ||||||||||| || |||| Sbjct 389327 AGATAACGTGCGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGG 389268 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || ||||| ||| | || | || || || | | ||| Sbjct 389267 GGGAATGCCTTCTTTATCTTGGATCTTAGCCTTGACGTTTTCAATTGTATCAGATGGTTC 389208 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| || || || || | ||||| ||||| |||||||| Sbjct 389207 AACTTCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAAATTTGCAT 389157 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||||||||||||||| |||| | || | || || || || || || |||||| Sbjct 390943 TCCTTTTGGATGTTGTAGTCGGACAAAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAG 390884 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || |||||||| ||||||| || | ||||| || || || || ||| | || Sbjct 390883 ATTAAACGCTGTTGATCTGGGGGAATGCCTTCTTTATCTTGGATTTTAGCCTTAACATTT 390824 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | |||||||| | | || ||||| | ||||| || || || || | ||||| ||| Sbjct 390823 TCAATGGTGTCAGATGGCTCGACCTCTAAAGTAATGGTTTTGCCAGTCAAAGTCTTGACG 390764 Query 44327 AAGATTTGCAT 44337 ||||||||||| Sbjct 390763 AAGATTTGCAT 390753 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185 || |||| ||||| ||| ||||| || ||||||||||||| || || | || Sbjct 400589 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 400530 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||| || || |||||||| |||||||| || ||||||| ||| | || | |||| | Sbjct 400529 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCT-CTTTGTC 400471 Query 44246 GTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | | || || | || |||| | ||| | || | | ||| ||||| | || ||||| Sbjct 400470 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 400411 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| ||||| || ||||| Sbjct 400410 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 400378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185 || |||| ||||| ||| ||||| || ||||||||||||| || || | || Sbjct 401501 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 401442 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||| || || |||||||| |||||||| || ||||||| ||| | || | |||| | Sbjct 401441 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCT-CTTTGTC 401383 Query 44246 GTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | | || || | || |||| | ||| | || | | ||| ||||| | || ||||| Sbjct 401382 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 401323 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| ||||| || ||||| Sbjct 401322 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359880092416614