Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq157162 120 2e-22 >seq157162 Length=2207 Score = 120 bits (132), Expect = 2e-22 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || |||||||| || || || ||||| || ||||| ||| |||| | | | ||| Sbjct 600 AATACCAAATGAAGTGTTGATTCCTTTTGGATATTGTAGTCGGATAGAGTACGTCCATCT 541 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || ||||||||||| ||| | || | ||||||||| || ||| || |||||||| || Sbjct 540 TCCAATTGTTTGCCGGCGAAAATTAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCC 481 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTT-TCTACATCTAAGGTAATGG 15329 |||||| ||| || ||| |||| ||||| || | || || || || || || |||| Sbjct 480 TGAATTTTAGCT-TTGACATTTTCAATGGTGTC-CGATGGCTCGACCTCCAAAGTGATGG 423 Query 15330 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || || || || ||||| || ||||||||||| Sbjct 422 TCTTGCCAGTTAGTGTTTTAACGAAAATTTGCAT 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361370125055595