Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq182946 84.2 2e-11 >seq182946 Length=2382 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 7/153 (5%) Strand=Plus/Plus Query 6490 CTTTGCC-GCGATAACATGCATTAACGGACCACCCTGAATACCCGGGAAGATAGCAGAAT 6548 |||| || |||||||||||||| ||||||||||| || |||| || || | ||| || | Sbjct 442 CTTTACCTGCGATAACATGCATCAACGGACCACCTTGGTTACCTGGAAAAACAGCTGAGT 501 Query 6549 TTACTTTCTT-GGCGAT-----ATCAGCATCGTTAGTAAGAATGAGACCACCACGAGGGC 6602 | | ||| || || | |||| | | | | |||||||| | ||| || || || | Sbjct 502 TCAGTTTTTTATGCAGTTTTTCATCACCGTTGCTGGTAAGAATAATACCGCCGCGGGGAC 561 Query 6603 CGCGCAAAGTTTTATGAGTTGTAGAAGTAACAA 6635 | |||||||||||| || || |||||||||| Sbjct 562 CCGCCAAAGTTTTATGTGTCGTGGAAGTAACAA 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552085763148600