Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq157162 87.8 2e-12 >seq157162 Length=2207 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || ||||| || || || || ||||| || | || ||| ||| Sbjct 388 AATGCAAATTTTCGTTAAAACACTAACTGGCAAGACCATCACTTTGGAGGTCGAG-CCAT 446 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| | | || ||| |||||| ||||||||||| |||| |||| Sbjct 447 CGGACACCATTGAAAATGTCAAAGCTAAAATTCAGGATAAAGAAGGTATCCCACCAGATC 506 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||| | || |||| || ||||||||||| ||||||| || | |||| || | Sbjct 507 AACAACGTCTAATTTTCGCCGGCAAACAATTGGAAGATGGACGTACTCTATCCGACTACA 566 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 | || ||||| || || || | ||| |||| ||| Sbjct 567 ATATCCAAAAGGAATCAACACTTCATTTGGTATTG 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424393820715400