Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq157162 127 2e-24 >seq157162 Length=2207 Score = 127 bits (140), Expect = 2e-24 Identities = 159/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| || || || || | || || || ||||||| | || || ||| | Sbjct 386 ACAATGCAAATTTTCGTTAAAACACTAACTGGCAAGACCATCACTTTGGAGGTCGAGCCA 445 Query 25056 TCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 || ||||| || || |||| |||| |||| ||| || |||||||| || ||||| Sbjct 446 TCGGACACCATTGAAAATGTCA---AAGCTAAAATTCAG-GATAAAGAAGGTATCCCACC 501 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 || ||||| || | ||||| |||||||||||||| ||||||| || ||| | ||| Sbjct 502 AGATCAACAACGTCTAATTTTCGCCGGCAAACAATTGGAAGATGGACGTACTCTATCCGA 561 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||| ||||| ||||| || || ||||| || Sbjct 562 CTACAATATCCAAAAGGAATCAACACTTCATTTGGT 597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432359985195425