Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq157162 156 8e-33 >seq157162 Length=2207 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||||||||| || || || || || |||||||| || || ||||| Sbjct 615 CCACCACGTAGACGCAATACCAAATGAAGTGTTGATTCCTTTTGGATATTGTAGTCGGAT 556 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| || || || |||||||| || || | |||||| || ||||| Sbjct 555 AGAGTACGTCCATCTTCCAATTGTTTGCCGGCGAAAATTAGACGTTGTTGATCTGGTGGG 496 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || || ||||| || || ||||| || |||||||| | || || || Sbjct 495 ATACCTTCTTTATCCTGAATTTTAGCTTTGACATTTTCAATGGTGTCCGATGGCTCGACC 436 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| |||||||| || || || || || || ||||| || |||||| || Sbjct 435 TCCAAAGTGATGGTCTTGCCAGTTAGTGTTTTAACGAAAATTTGCATTGTG 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919510790277400