Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_009821.1 Length=164270 Score E Sequences producing significant alignments: (Bits) Value seq183044 84.2 2e-11 >seq183044 Length=3031 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 133230 TTCATCACGAGCAATAAATTTCATGATCTTCGCGTTACCTTCCAGTAAGCCACGTTCGGC 133289 ||| ||||||||||||| || ||||| || || |||||||||| || | || || || Sbjct 1449 TTCGTCACGAGCAATAAGCTTAATGATTTTAGCATTACCTTCCATCAATTCGCGCTCTGC 1508 Query 133290 -AAAGCTGAAAGTACATGCAAAGGACACATAAAAACGGATTGCTTCCAGTGCATTAAC 133346 ||||| ||||| ||| ||||| ||| |||||||| |||||||| | ||||| || Sbjct 1509 GAAAGC-GAAAGAACAGGCAAAACTCACGTAAAAACGTATTGCTTCTAACGCATTGAC 1565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524331898486000