Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq96136 95.1 1e-14 >seq96136 Length=5821 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 175927 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 175986 ||| || ||||| |||||||| || |||||||||| ||| || || | ||||||||| Sbjct 5316 ATCCTTTCCACCTTGCAGACGCGTACCGAATTGACCACGTGGTTCTAGTAAATTGATATT 5257 Query 175987 GTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACC 176046 |||||| || | ||| | | ||| || || ||||| ||| || || | |||||| Sbjct 5256 GTTTGAACCAACATAATTTTGCGCTAAATTAACAATTGTAGATTGTAGTGACATTTCACC 5197 Query 176047 GTGATGGTAGGCCGACTTGTCCGCCAC 176073 |||||| ||||| ||| | || ||||| Sbjct 5196 GTGATGATAGGCAGACATTTCAGCCAC 5170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612101539972200