Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq157162 116 9e-21 >seq157162 Length=2207 Score = 116 bits (128), Expect = 9e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || |||||||||| |||||||| | | ||| | ||||||||||| || Sbjct 591 TGAAGTGTTGATTCCTTTTGGATATTGTAGTCGGATAGAGTACGTCCATCTTCCAATTGT 532 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || |||||||| || ||||| || || || || || |||||| |||||||| ||| Sbjct 531 TTGCCGGCGAAAATTAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCCTGAAT-TTT 473 Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || || ||| | |||||| | || || || ||||| ||||| ||||| || || Sbjct 472 AGCTTTGACATTTTCAATGGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGT 413 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || ||||| || |||||||| Sbjct 412 TAGTGTTTTAACGAAAATTTG 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176152941305765