Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq157162 96.9 2e-15 >seq157162 Length=2207 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCT--TTCTTTTTGTATATTATAATCGG 39550 || || || | ||||| ||||||||| ||||| | ||| ||||| ||||| || |||| Sbjct 615 CCACCACGTAGACGCAATACCAAATG--AAGTGTTGATTCCTTTTGGATATTGTAGTCGG 558 Query 39551 CCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 | | ||| |||| ||||||||||| ||| | ||||||| ||| || ||||| | | Sbjct 557 ATAGAGTACGTCCATCTTCCAATTGTTTGCCGGCGAAAATTAGACGTTGTTGATCTGGTG 498 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | |||||||| || ||||| ||| | | | | ||||| | || | Sbjct 497 GGATACCTTCTTTATCCTGAATTTTAGCTTTGACATTTTCAATGGTGTCCGATGGCTCGA 438 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||||||| || || || || |||| ||||| ||||| || ||||| Sbjct 437 CCTCCAAAGTGATGGTCTTGCCAGTTAGTGTTTTAACGAAAATTTGCAT 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346593608336735