Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq183044 100 4e-16 >seq183044 Length=3031 Score = 100 bits (110), Expect = 4e-16 Identities = 145/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 126995 TTTAGCAATATCAACCATTTCTGGGTCATCTTCGCCGTTTTGC--CAAGTGCGAATTTGA 127052 ||| ||||| ||| |||||||| | |||||||| ||| | | ||||| | | | Sbjct 1365 TTTGGCAATTTCAGCCATTTCTAGATCATCTTCACCGCTACGTAACAAGTTTAAGAT--A 1422 Query 127053 TACTGGGTGCCTTTGAGGTGCAATTGTTCATCACGCGCAATCAGTTTCATGATCTTAGCG 127112 | ||| || || | | ||| || ||| ||||| ||||| || || ||||| ||||| Sbjct 1423 TGCTGAGTTCCGGTCAAGTGTAACGCTTCGTCACGAGCAATAAGCTTAATGATTTTAGCA 1482 Query 127113 TTGCCTTCCATCAAACCGCGTTCGGCAAACGAGAAGGTGCAGGCGAAGCTTACATAAAAA 127172 || ||||||||||| |||| || || || | ||| | ||||| || || || |||||| Sbjct 1483 TTACCTTCCATCAATTCGCGCTCTGCGAAAGCGAAAGAACAGGCAAAACTCACGTAAAAA 1542 Query 127173 CGAATCGCTTCCAAAGCGTTTAC 127195 || || ||||| || || || || Sbjct 1543 CGTATTGCTTCTAACGCATTGAC 1565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 719078273349600