Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq66438 104 3e-17 >seq66438 Length=2923 Score = 104 bits (114), Expect = 3e-17 Identities = 336/518 (65%), Gaps = 22/518 (4%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAA-GCAAAGTCC 119554 ||||| || ||| | |||||||| || ||||| |||||||| ||| | ||| || Sbjct 1078 GCAAAATCACAATGTAAACCTTCATCACGCGAGATTAGCTCATTGGAGAATGTCAAG-CC 1136 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||| || || | ||| || | ||||||||| | | |||||| || |||||| || Sbjct 1137 GGGCATTAGACCACGTTTTTTCAACCAAAAGATCGAAGCAAAACTACCGCTAAAGAATAT 1196 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC----GA 119670 ||| || || || || || | | ||| ||| ||||| | | ||| | || Sbjct 1197 GCCTTCAACGGCAGCAAATGCAATGACACGTTCACCAAAAT-TAGCCGCTTTTGATGAGA 1255 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||| || ||||| | |||||||||| | | |||| |||| || || | | Sbjct 1256 TCCATGCTAGTGCCCAATCAGCCTTACGCTTAACGGCAGGGATCGTTTCAATAGCATTAA 1315 Query 119731 AAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCT 119790 | | || | |||||||||| || ||||||| || | || | | Sbjct 1316 ATANTTTC-------------CATCCTTAATGTAGGTATCAATAAGAATGCTATACATTT 1362 Query 119791 CACCATGAACCATTT-CATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATT 119849 | ||| || ||| ||||| | ||| || ||||||| | || ||||||| |||| Sbjct 1363 CTGAATGCACATTTTCCATTG-CTATTTGAAAGCCATAAAAGCAACGTGCTTCGGTAATT 1421 Query 119850 TGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCG 119909 || ||||| | | ||| | | ||||||| |||||| |||||||| | ||| Sbjct 1422 TGTACTTCTTGACTGAAACGTTCAACTAGATTTTCATTAACAATACCATCGGAGGCGGCG 1481 Query 119910 AAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTCCAGTCG 119969 ||||| ||||| | || || ||| | ||||||| ||| | || | ||| ||| Sbjct 1482 AAGAAAGCTAAAACGTGTGATACGAAATGACGTTCATTGTCGGTAAGACGTACCCAATCG 1541 Query 119970 TCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCA 120007 ||||| ||||| || | || |||||||| | ||||| Sbjct 1542 TCCATGTCTTTGGAGAGATCAACCTCTTCTACGGTCCA 1579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587626545551000