Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq183104 84.2 3e-11 >seq183104 Length=3631 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 112209 TTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCGCTGGTTCGAATCCAGC 112268 ||||||||| ||| ||||||| | || ||| || ||||| | ||||||| ||| | Sbjct 2065 TTAGCTCAGCTGGTTAGAGCACAGCACTCATAATGCTGGGGTCACAGGTTCGATTCCTGT 2124 Query 112269 ACGGCGC-ACCAAAATTCGGGGATGTGGTGAAATTGGCAGACACACCAGATTTAGGTTCT 112327 | | || |||| | || | || |||| |||||||| |||| ||||||||||||||||| Sbjct 2125 A-GTAGCTACCATATTTTGCGGGAGTGGCGAAATTGGTAGACGCACCAGATTTAGGTTCT 2183 Query 112328 GGC 112330 ||| Sbjct 2184 GGC 2186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750880441289800