Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq183115 107 4e-19 >seq183115 Length=3769 Score = 107 bits (118), Expect = 4e-19 Identities = 185/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 2009 TTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTTTTTAACTTGCC 2068 |||||| || || ||||| ||| ||| ||||||||||| || |||| | ||| Sbjct 2674 TTCAGTAGTATATTTTTCAACCCCTGCTTGATCAGTCCATTTACGAGTTTGCAGTGCGCC 2615 Query 2069 TTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCAGCTAACTTTCC 2128 |||||| || | || | || || || | |||||| || | |||||| | ||| || Sbjct 2614 TTCAATATAAACCTGAGAGCCTTTGCGAAGATACTCACCAGCAACTTCAGCCAGCTTGCC 2555 Query 2129 AAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTGCTTTTATCCTT 2188 ||| | |||||| | |||||||||||| | ||||| | || ||||| || || Sbjct 2554 AAACAAAACAATACGGTGCCACTCGGTCTTCTCTTTAGTTTCCCCAGTTTGCTTGTCACG 2495 Query 2189 CCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTAGGTATGTAACG 2248 ||| |||| ||| || || || | ||| || || ||| || || || ||||| || Sbjct 2494 CCAGCTTTCTGAAGTAGCCAGCGTGATGTTGGCAACAGCACCGCCATTCGGCATGTAGCG 2435 Query 2249 AATTTCTGGATCTTGACCAGCATTACCAA 2277 || ||| || |||||||| ||| |||| Sbjct 2434 AACTTCCGGGTCTTGACCCAGATTTCCAA 2406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97748374026270