Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq114852 87.8 3e-12 >seq114852 Length=3422 Score = 87.8 bits (96), Expect = 3e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013 || |||| ||||| | |||| | ||| || |||||| || || |||||||| | Sbjct 1984 TCGAACTCATCACCCCATACCTCATGCAGACCAGGACACTTGTGAGGGCACATCAGCGAC 2043 Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073 || | | || ||| || | | ||| || || || || ||||| | || | ||| Sbjct 2044 CAATCTTCATTAGCTTCAACACGTTTCATAAAAAGATCTGGTATCCATAAAGCATAAAAT 2103 Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133 | |||||| | || || || ||| ||| |||||||| | | ||||||||||||||| Sbjct 2104 AAATCTCTAGCACGATGTTCTTCCTTGCCAGTGTTTTTCTTTAAATCCAAAAACTCAAAT 2163 Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCC 222193 | || || ||||| || || | ||||| || | ||||| || || || || ||| Sbjct 2164 ACATCTGCATGCCATGGTTCTAAATAGATTGCAAACGCGCCAGGACGTTTACCACCGCCC 2223 Query 222194 TGATCCAC 222201 ||||| || Sbjct 2224 TGATCTAC 2231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926716642404800