Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq183115 125 2e-24 >seq183115 Length=3769 Score = 125 bits (138), Expect = 2e-24 Identities = 193/275 (70%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 4158 ATTGCCTCCTTGCTTGCCACCA---AGCATTTGCATGGTTCCACCAACGCCCACGATGAC 4214 ||||||||| || ||| || | ||||| ||||| || || ||||| || || || Sbjct 2734 ATTGCCTCCCTGACTGCGACTACCCAGCATCTGCATAGTGCCTCCAACATTTACTATTAC 2675 Query 4215 TTCGGTAGTGAACCTATCCTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTTCC 4274 ||| ||||| | | || || |||||| |||||| | || ||| | || Sbjct 2674 TTCAGTAGTATATTTTTCAACCCCTGCTTGATCAGTCCATTTACGAGTTTGCAGTGCGCC 2615 Query 4275 TTCAAGATAAACCTCAGAGCCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCC 4334 ||||| |||||||| ||||||||| || ||||| || | |||| ||| ||||| || || Sbjct 2614 TTCAATATAAACCTGAGAGCCTTTGCGAAGATACTCACCAGCAACTTCAGCCAGCTTGCC 2555 Query 4335 GCTCATTACCACGCGGTGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACG 4394 || || | ||||||||||| |||| ||| || || ||||||||||| ||||| Sbjct 2554 AAACAAAACAATACGGTGCCACTCGGTCTTCTCTTTAGTTTCCCCAGTTTGCTTGTCACG 2495 Query 4395 CCATTGTTCTGACGTAGCAACTGTAAGGTTTGCAA 4429 ||| |||||| ||||| | || | ||| |||| Sbjct 2494 CCAGCTTTCTGAAGTAGCCAGCGTGATGTTGGCAA 2460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126469721962320